iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005492

UUCD1 version

UUC-ArL-00841

Ensembl Protein ID

fgenesh1_pm.C_scaffold_2001595

UniProt Accession

D7KTT0; D7KTT0_ARALL

Genbank Protein ID

EFH63896.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348714

Gene Name

ATL8; ARALYDRAFT_316562

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_2001595	fgenesh1_pm.C_scaffold_2001595	fgenesh1_pm.C_scaffold_2001595

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-09	39.2	104	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f   d+++vlp CgH fh +C+  w         + +CP Cr
   Q: 104  CAICLTEFaaGDELRVLPqCGHGFHVSCIDTW------LGSHSSCPSCR 146
           ********88555*******************......99********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGRLLFRLLQ ETNSTSPPEA PPPFNSDLVL ILAVLLCALT CIIGLIAVSR CAWLRRIASR 60
NRSDQTHPPP VAAANKGLKK KVLRSLPKLT YSPDSPPAEK LVECAICLTE FAAGDELRVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGCGCC TTCTCTTCCG TCTTCTCCAA GAAACCAATT CTACATCTCC GCCGGAAGCT 60
CCTCCACCTT TCAACTCCGA CCTCGTCCTC ATCCTCGCGG TTCTTCTTTG TGCACTGACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_316562

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002926	Amborella trichopoda	51.34	9.00e-28	115.00
IUUC-Ath-006886	Arabidopsis thaliana	94.57	6.00e-83	298.00
IUUC-Bdi-014058	Brachypodium distachyon	59.30	2.00e-25	107.00
IUUC-Bol-015898	Brassica oleracea	78.49	4.00e-64	236.00
IUUC-Bra-017035	Brassica rapa	77.97	9.00e-54	201.00
IUUC-Gma-042991	Glycine max	67.52	1.00e-39	155.00
IUUC-Lpe-050964	Leersia perrieri	49.04	3.00e-29	120.00
IUUC-Mtr-057800	Medicago truncatula	63.83	3.00e-44	170.00
IUUC-Mac-064619	Musa acuminata	56.90	2.00e-30	124.00
IUUC-Oni-082929	Oryza nivara	51.32	2.00e-28	117.00
IUUC-Opu-083456	Oryza punctata	61.64	5.00e-23	99.80
IUUC-Oru-084952	Oryza rufipogon	51.68	4.00e-31	126.00
IUUC-Osa-086101	Oryza sativa	51.32	2.00e-28	117.00
IUUC-Psi-093877	Pelodiscus sinensis	46.27	3.00e-13	66.20
IUUC-Pop-098856	Populus trichocarpa	62.37	6.00e-48	182.00
IUUC-Ppe-101319	Prunus persica	58.86	3.00e-46	177.00
IUUC-Sit-110757	Setaria italica	58.33	8.00e-28	115.00
IUUC-Sly-111159	Solanum lycopersicum	66.67	5.00e-43	166.00
IUUC-Stu-112165	Solanum tuberosum	70.27	1.00e-41	161.00
IUUC-Sbi-113838	Sorghum bicolor	53.55	4.00e-28	117.00
IUUC-Tca-121444	Theobroma cacao	61.26	5.00e-51	192.00
IUUC-Tae-122956	Triticum aestivum	53.76	1.00e-21	95.50
IUUC-Vvi-131309	Vitis vinifera	65.94	1.00e-44	171.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence