iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007004

UUCD1 version

UUC-ArT-00380

Ensembl Protein ID

AT1G80400.1

UniProt Accession

Q9C965; Q9C965_ARATH

Genbank Protein ID

AAG52430.1; AAL32923.1; AAN15389.1; AEE36398.1; BAH19697.1

Protein Name

AT1G80400 protein; Putative RING zinc finger protein; Putative RING zinc finger protein; 53384-54880; RING/U-box superfamily protein

Genbank Nucleotide ID

AC018848; AY062845; BT000070; CP002684; AK317002

Gene Name

At1g80400; At1g80400/F5I6.15; F5I6.15; F5I6_15

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G80400	AT1G80400.1	AT1G80400.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.00e-09	38.1	355	396

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++  +++++ lpC Hvfh dC+ kw       + +++CPlC+
   Q: 355  CCICLTRYgdDEQVRELPCSHVFHVDCVDKW------LKINATCPLCK 396
           ********87666******************......**********7 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MDVSSIVRNT TLTDQDPLLM DHGNREHIVD ITSNDEEDSS SRSSLDELTP QGNSHQGEET 60
VLSSSNATQQ HPTHPSPPQQ RPTSSRRGDN GNGRRTRSPL NSGLWISVEL VVTVAQIVAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTATTTACT GCAACTCTGC GAAAGCTGCA AAAATAAAAT CAGCCGATTC CTATTTTTTT 60
ATTTGTCTTC CTGTGAAGAA TGAAAAAGAA GAAGAGTACA ACAAGTACTA AGAAGACGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT1G80400

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000618	Aegilops tauschii	57.10	2.00e-113	402.00
IUUC-Aly-006190	Arabidopsis lyrata	84.30	1.00e-164	572.00
IUUC-Bdi-014783	Brachypodium distachyon	53.40	3.00e-104	370.00
IUUC-Bol-016575	Brassica oleracea	75.54	2.00e-134	471.00
IUUC-Bra-017338	Brassica rapa	77.11	7.00e-143	499.00
IUUC-Gma-043870	Glycine max	57.28	1.00e-137	482.00
IUUC-Hvu-047447	Hordeum vulgare	56.81	4.00e-114	404.00
IUUC-Mac-065469	Musa acuminata	53.88	5.00e-111	393.00
IUUC-Ome-081533	Oryza meridionalis	52.24	3.00e-83	301.00
IUUC-Oru-084956	Oryza rufipogon	51.99	1.00e-83	302.00
IUUC-Osa-085907	Oryza sativa	52.24	8.00e-84	303.00
IUUC-Pno-095077	Phaeosphaeria nodorum	46.94	1.00e-10	58.50
IUUC-Ppe-101804	Prunus persica	69.94	4.00e-133	467.00
IUUC-Pte-104334	Pyrenophora teres	38.75	3.00e-11	60.50
IUUC-Pyt-104481	Pyrenophora triticirepentis	37.21	3.00e-12	63.90
IUUC-Tca-121516	Theobroma cacao	62.47	4.00e-141	493.00
IUUC-Tae-124252	Triticum aestivum	51.41	9.00e-82	296.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence