iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016768

Ensembl Protein ID

Bra005066.1-P

UniProt Accession

M4CLH9; M4CLH9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra005066	Bra005066.1	Bra005066.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.40e-06	27.8	73	117

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg....plvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCl+ +k+g     ++  C H fh++C+  ++      + +++ CP+Cr
   Q: 73   CSICLTKMKEGgghaIFTAECSHSFHFHCIaSNV------KHGNQVCPVCR 117
           ********887778799999*********97777......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGTKWRKMKL ALGLNLCTYL PRTLEESPPA LNSTERLSDV ALLSPLNWPM TPTPSSHGLK 60
LSRNSSKKSS KTCSICLTKM KEGGGHAIFT AECSHSFHFH CIASNVKHGN QVCPVCRAKW 120

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Nucleotide Sequence
(Fasta)

ATGGGAACTA AATGGAGGAA GATGAAACTG GCTTTAGGTC TCAATCTCTG CACTTACCTC 60
CCACGAACAC TAGAGGAATC ACCTCCTGCT TTGAACTCCA CAGAGAGATT ATCAGATGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0732--Signal

Interpro

IPR032838--Vwaint_dom
IPR002035--VWF_A
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50234--VWFA
PS50089--ZF_RING_2

Pfam

PF00092--VWA
PF14624--Vwaint
PF13639--zf-RING_2

SMART

SM00184--RING
SM00327--VWA

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005469	Arabidopsis lyrata	69.64	0.00e+00	879.00
IUUC-Ath-007351	Arabidopsis thaliana	81.00	0.00e+00	1069.00
IUUC-Bdi-014668	Brachypodium distachyon	50.22	7.00e-178	617.00
IUUC-Bol-016018	Brassica oleracea	96.80	0.00e+00	1258.00
IUUC-Mtr-058161	Medicago truncatula	61.31	0.00e+00	822.00
IUUC-Mac-065116	Musa acuminata	50.53	2.00e-168	585.00
IUUC-Sit-109961	Setaria italica	49.58	2.00e-139	489.00
IUUC-Stu-112617	Solanum tuberosum	58.47	0.00e+00	752.00
IUUC-Tca-121133	Theobroma cacao	63.80	0.00e+00	847.00
IUUC-Tae-123973	Triticum aestivum	52.36	3.00e-172	598.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence