iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G73040	BRADI1G73040.1	BRADI1G73040.1
BRADI1G73040	BRADI1G73040.2	BRADI1G73040.2
BRADI1G73040	BRADI1G73040.3	BRADI1G73040.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-07	31.6	200	240

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C iC+ ++++g   + lpC+Hv+ha+C+ +w       s +  CP+C
   Q: 200  CVICQMEYRRGdlQMALPCKHVYHASCVTRW------LSINKVCPVC 240
           ****999988855456***************......********** PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MNGSRQMELH YINTGFPYTI TESFMDFFEG LTYAHADFAL ADAFQDQANP YWTMMQTNSY 60
KYGYSGASNY YSYGHVYDMN DYMHRADGGR RIWDNPTPAS NTDSPNVVLQ GAAEAPHPRA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCTTGGGGA GATAGGGACG AGCGGGGCGG ACAAGAGGAC GACAGCACGC GAGCCACAGA 60
AGATCTCGTC CTTCGCCCCC CTCCCTCCTC CTTTCCTCCC TCCCCACTCC TCCAGCCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0048437--P:floral organ development
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000725	Aegilops tauschii	89.68	2.00e-117	414.00
IUUC-Atr-002639	Amborella trichopoda	55.78	1.00e-74	272.00
IUUC-Aly-006328	Arabidopsis lyrata	50.60	6.00e-66	243.00
IUUC-Ath-006928	Arabidopsis thaliana	50.00	5.00e-64	236.00
IUUC-Bol-015817	Brassica oleracea	50.00	9.00e-60	222.00
IUUC-Bra-017680	Brassica rapa	50.59	1.00e-61	228.00
IUUC-Cin-025552	Ciona intestinalis	39.81	6.00e-17	79.30
IUUC-Gma-043363	Glycine max	52.44	7.00e-67	246.00
IUUC-Hvu-047311	Hordeum vulgare	89.68	3.00e-113	400.00
IUUC-Lpe-051357	Leersia perrieri	83.73	5.00e-111	392.00
IUUC-Mtr-058385	Medicago truncatula	48.66	2.00e-64	238.00
IUUC-Mac-064965	Musa acuminata	63.89	4.00e-88	316.00
IUUC-Oba-075640	Oryza barthii	90.08	9.00e-118	415.00
IUUC-Obr-076687	Oryza brachyantha	89.29	4.00e-116	409.00
IUUC-Ogl-077270	Oryza glaberrima	90.08	7.00e-118	415.00
IUUC-Ogu-078788	Oryza glumaepatula	90.08	4.00e-118	417.00
IUUC-Oin-079201	Oryza indica	90.08	8.00e-118	415.00
IUUC-Olo-080862	Oryza longistaminata	85.71	1.00e-108	384.00
IUUC-Ome-081787	Oryza meridionalis	89.29	1.00e-116	411.00
IUUC-Oni-082723	Oryza nivara	90.08	7.00e-118	415.00
IUUC-Opu-084164	Oryza punctata	89.29	6.00e-116	409.00
IUUC-Oru-084238	Oryza rufipogon	90.08	1.00e-117	414.00
IUUC-Osa-085989	Oryza sativa	90.08	7.00e-118	415.00
IUUC-Pop-099571	Populus trichocarpa	53.78	3.00e-69	253.00
IUUC-Ppe-101485	Prunus persica	55.02	3.00e-66	243.00
IUUC-Sit-110753	Setaria italica	85.71	1.00e-129	454.00
IUUC-Sly-111293	Solanum lycopersicum	52.03	7.00e-68	249.00
IUUC-Stu-112116	Solanum tuberosum	52.03	1.00e-68	251.00
IUUC-Sbi-114143	Sorghum bicolor	84.92	1.00e-129	454.00
IUUC-Tca-121815	Theobroma cacao	56.80	1.00e-75	275.00
IUUC-Tae-123125	Triticum aestivum	90.08	2.00e-117	414.00
IUUC-Tur-125974	Triticum urartu	90.08	2.00e-117	414.00
IUUC-Vvi-130977	Vitis vinifera	56.35	3.00e-73	267.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence