iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114752

Ensembl Protein ID

Sb10g005570.1

UniProt Accession

A0A194YHN1; A0A194YHN1_SORBI

Genbank Protein ID

KXG19479.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G064600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g005570	Sb10g005570.1	Sb10g005570.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UIM	3.40e-07	30.3	77	93
UBD/Alpha-Helix/UIM	1.3e-05	14.5	49	65

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqEe 17
           +Ede+L++A+++Sl++e
   Q: 77   EEDEQLARAIQESLNVE 93
           7*************997 PP

UBD/Alpha-Helix/UIM

   S: 4    eeLqlAlalSlqEeees 20
           e++ +A+alSl+Eee++
   Q: 49   EDIDRAIALSLSEEEQR 65
           899************86 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGWLTKFFRG STHNISEGQY HSRPAEDTAW NEPSSSPVVT DIFSEFNNED IDRAIALSLS 60
EEEQRKAKTI DKDMHLEEDE QLARAIQESL NVESPPPSRE NGSANGGNAY HPLPFMFSSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTTGGC TGACCAAGTT TTTTAGAGGC TCAACCCACA ATATCTCGGA AGGGCAGTAT 60
CACAGCAGGC CTGCAGAAGA TACAGCATGG AATGAACCCT CTAGCTCTCC TGTTGTCACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022087--DA1-like
IPR003903--UIM_dom
IPR001781--Znf_LIM

PROSITE

PS00478--LIM_DOMAIN_1
PS50023--LIM_DOMAIN_2
PS50330--UIM

Pfam

PF12315--DA1-like
PF00412--LIM
PF02809--UIM

SMART

SM00132--LIM
SM00726--UIM

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000888	Aegilops tauschii	86.51	0.00e+00	772.00
IUUC-Aml-001609	Ailuropoda melanoleuca	28.33	5.00e-03	33.90
IUUC-Atr-002465	Amborella trichopoda	75.26	0.00e+00	715.00
IUUC-Aly-005589	Arabidopsis lyrata	72.38	0.00e+00	635.00
IUUC-Ath-007530	Arabidopsis thaliana	75.00	1.00e-178	618.00
IUUC-Ani-009487	Aspergillus nidulans	42.31	2.00e+00	26.90
IUUC-Bdi-014789	Brachypodium distachyon	86.87	0.00e+00	850.00
IUUC-Bol-015361	Brassica oleracea	74.00	8.00e-180	622.00
IUUC-Bra-016788	Brassica rapa	51.81	3.00e-97	347.00
IUUC-Dre-027455	Danio rerio	21.16	3.00e-04	40.00
IUUC-Dse-031181	Dothistroma septosporum	32.39	2.00e-04	40.40
IUUC-Dme-031605	Drosophila melanogaster	27.21	4.00e-06	47.00
IUUC-Fca-035699	Felis catus	28.33	4.00e-03	34.30
IUUC-Gmo-038981	Gadus morhua	25.00	6.00e-03	33.50
IUUC-Gga-040724	Gallus gallus	22.41	5.00e-05	42.40
IUUC-Gma-043003	Glycine max	60.81	0.00e+00	645.00
IUUC-Lpe-050858	Leersia perrieri	86.19	0.00e+00	857.00
IUUC-Loc-052468	Lepisosteus oculatus	22.37	3.00e-04	40.40
IUUC-Mpo-057455	Magnaporthe poae	28.57	2.80e-01	28.90
IUUC-Mtr-058103	Medicago truncatula	63.41	0.00e+00	652.00
IUUC-Mla-059141	Melampsora laricipopulina	27.50	1.00e-06	47.40
IUUC-Mac-065516	Musa acuminata	64.81	9.00e-58	214.00
IUUC-Oba-075285	Oryza barthii	91.77	0.00e+00	875.00
IUUC-Obr-076433	Oryza brachyantha	91.19	0.00e+00	887.00
IUUC-Ogl-077044	Oryza glaberrima	91.77	0.00e+00	875.00
IUUC-Ogu-078868	Oryza glumaepatula	91.77	0.00e+00	875.00
IUUC-Oin-079737	Oryza indica	92.60	0.00e+00	809.00
IUUC-Olo-080337	Oryza longistaminata	85.58	0.00e+00	862.00
IUUC-Oni-082197	Oryza nivara	91.77	0.00e+00	875.00
IUUC-Opu-083815	Oryza punctata	85.74	0.00e+00	847.00
IUUC-Oru-085246	Oryza rufipogon	91.77	0.00e+00	875.00
IUUC-Osa-086082	Oryza sativa	91.77	0.00e+00	875.00
IUUC-Ola-087406	Oryzias latipes	34.88	1.00e-08	54.30
IUUC-Olu-087728	Ostreococcus lucimarinus	33.69	2.00e-52	199.00
IUUC-Ppa-096027	Physcomitrella patens	52.83	9.00e-133	466.00
IUUC-Pop-100076	Populus trichocarpa	68.79	0.00e+00	686.00
IUUC-Pca-100691	Procavia capensis	28.33	2.00e-03	35.40
IUUC-Pyt-104720	Pyrenophora triticirepentis	22.11	5.00e-04	37.70
IUUC-Smo-108841	Selaginella moellendorffii	65.21	4.00e-137	479.00
IUUC-Sit-110147	Setaria italica	89.88	0.00e+00	902.00
IUUC-Sly-111689	Solanum lycopersicum	73.02	0.00e+00	711.00
IUUC-Stu-112186	Solanum tuberosum	72.62	0.00e+00	709.00
IUUC-Sre-115199	Sporisorium reilianum	33.78	4.00e-08	53.10
IUUC-Tni-120393	Tetraodon nigroviridis	27.12	1.40e-02	32.00
IUUC-Tca-121863	Theobroma cacao	62.97	0.00e+00	642.00
IUUC-Tae-125101	Triticum aestivum	87.10	0.00e+00	856.00
IUUC-Tur-126006	Triticum urartu	83.92	0.00e+00	776.00
IUUC-Vvi-131286	Vitis vinifera	73.51	0.00e+00	720.00
IUUC-Zma-135630	Zea mays	91.94	0.00e+00	915.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence