iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007563

UUCD1 version

UUC-ArT-00619

Ensembl Protein ID

AT4G15975.1

UniProt Accession

Q8LF65; F4JKY8; O23446; ATL17_ARATH

Genbank Protein ID

CAB10376.1; CAB78639.1; AEE83676.1; AAM61585.1

Protein Name

RING-H2 finger protein ATL17; RING-type E3 ubiquitin transferase ATL17

Genbank Nucleotide ID

Z97340; AL161542; CP002687; AY085027

Gene Name

ATL17; At4g15975; dl4025w; FCAALL.90

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G15975	AT4G15975.1	AT4G15975.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.30e-07	30.2	76	118

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++fkd    +v+p C+H+fh dC+ +w         + +CPlCr
   Q: 76   CSVCLSEFKDNesGRVMPnCKHTFHVDCIDMW------FHSHSSCPLCR 118
           ********66444667778*************......888999****8 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.

Protein Sequence
(Fasta)

MLTTTILILL IVILMVSLHL YYRWYLLRSS PFNRTTAAST FFTDPSSTPG GLNPSIIKSL 60
PIFTFSAVTA LFAMECSVCL SEFKDNESGR VMPNCKHTFH VDCIDMWFHS HSSCPLCRSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTAAATAA TATTTAATAT TCATTAACAA AAACTATAAA TGATATAAAA ACTATACCTC 60
TATAATAGCT TGGCATGCAG TATTTCAAAC TAGTCATCTT TGACCATTTA ACTAAAGATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-0611--Plant defense
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0006952--P:defense response
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT4G15975

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006425	Arabidopsis lyrata	76.09	2.00e-76	277.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence