iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.1__2866__AT1G24330.1	fgenesh2_kg.1__2866__AT1G24330.1	fgenesh2_kg.1__2866__AT1G24330.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.40e-30	104.6	263	335

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pee +CpIsl+lM+dPv+++sG+ty+r +Iekw+++g+++cP+t+q+l + +l+Pn+ ++ li +wce+n++
   Q: 263  PPEERRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVKGLIASWCEQNGI 335
           59999*****************************************************************987 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDVSELEENL FAASDAKLHR DMCKELSAVY CKVLSIFPSL EEARPRSKSG IQALCSLHIA 60
LEKAKNILQH CSECSKLYLK AKSALIDNLR RVEDIVPSSI GSQILDIVGE LEHTKFLLDP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGTTA GCGAGCTCGA GGAGAATTTG TTCGCTGCTA GCGATGCCAA GGTACATATA 60
TGCTCATTAA TCATATATGT TTCAATCATA AATTCTTTCT CAAAGATTCT TGTCGGTTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR006911--ARM-rpt_dom
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04826--Arm_2
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0009507--C:chloroplast
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_472912

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007134	Arabidopsis thaliana	92.92	0.00e+00	1468.00
IUUC-Bol-015505	Brassica oleracea	82.99	0.00e+00	1284.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence