iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.1__3796__AT1G45180.1	fgenesh2_kg.1__3796__AT1G45180.1	fgenesh2_kg.1__3796__AT1G45180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-07	31.7	595	636

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++k+g     l CgH fh +C++ w       +++ +CP+C+
   Q: 595  CCICQEEYKEGedIGMLECGHDFHSQCIKEW------LKQKNLCPICK 636
           ********665557789**************......99********6 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MQGERASLGS LSEALNFEHG STSSNAVIDQ QIRWENIHNY GDNELQDYMS LGADTNPAFA 60
NSVYHEQRGL HRFNIGEASS SGTKNEATSH TEQWKGIVRF EERRNDKIEL SPLFVQPSNG 120

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Nucleotide Sequence
(Fasta)

TCTCATTTGG TTTGTGTGCT TCGCTTTCGC TTTCCTCAAT TCTCTTCTTC TTCTTCATTT 60
TTGCCTATTT CCCTCTTTTC TCCGCAATCG GTTTCTTCTC TCATTGTCTT TTGACGAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_473842

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007036	Arabidopsis thaliana	86.42	0.00e+00	1017.00
IUUC-Bol-015592	Brassica oleracea	62.48	0.00e+00	685.00
IUUC-Bra-017092	Brassica rapa	55.64	9.00e-156	543.00
IUUC-Gma-042748	Glycine max	37.13	1.00e-98	353.00
IUUC-Mla-059067	Melampsora laricipopulina	40.58	2.00e-10	60.50
IUUC-Ola-087455	Oryzias latipes	35.88	5.00e-16	79.70
IUUC-Pop-099945	Populus trichocarpa	36.70	8.00e-100	357.00
IUUC-Ppe-101513	Prunus persica	40.75	3.00e-115	408.00
IUUC-Sly-111039	Solanum lycopersicum	37.31	2.00e-93	336.00
IUUC-Stu-112737	Solanum tuberosum	37.25	8.00e-81	294.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence