iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000095083.2	ENSDART00000146444.2	ENSDARP00000113126.1
ENSDARG00000095083.2	ENSDART00000142854.1	ENSDARP00000119310.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-06	29.1	12	67
E3 activity/RING/RING	9.70e-08	33.3	16	59

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk....tcPvtrqplteedl 55
           ++f+C+I l+l +dP  +p+G+++  s+I  + +++++    +cP +rq++t++ +
   Q: 12   DQFNCSICLDLLKDPAAIPCGHSFCMSCISGYWDQDEQkgvySCPQCRQTFTPRPV 67
           68*******************************888777999********998765 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCl+ +kd p   pCgH f+ +C+   w   ++++++  +CP Cr
   Q: 16   CSICLDLLKD-PAAIPCGHSFCMSCIsGYW--DQDEQKGVYSCPQCR 59
           **********.999************5555..77779*********8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MAESSVSLAQ EDQFNCSICL DLLKDPAAIP CGHSFCMSCI SGYWDQDEQK GVYSCPQCRQ 60
TFTPRPVLGK NFILTEVVEN IRKTKLQAAR PAQCYSESVD VECDVCTGRK YKAVKSCLVC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGAAT CCAGTGTTTC TTTGGCTCAG GAGGATCAGT TCAACTGTTC AATTTGTCTG 60
GATCTACTGA AGGATCCAGC GGCCATTCCC TGTGGACACA GTTTCTGTAT GAGCTGTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence