iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042682

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000841

Gene Name

SCD1; LOC100818305; GLYMA_08G040500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA08G04510	GLYMA08G04510.1	GLYMA08G04510.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-29	101.8	951	988
UBD/Beta-Prp	8.00e-50	171.3	871	1045

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH ++v+c++  s+ +++++s+Dgt+k+WD+rt++++ 
   Q: 951  GHDGPVSCVRTlSGERVLTASHDGTVKMWDVRTDRCVA 988
           8********9658899*******************985 PP

UBD/Beta-Prp

   S: 55   vtavkfspdgk.ilvtgseDrtikvwdls..tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncv 143
           v+++  ++++  ++++gs+D  +k+wd+s   ++   tlkgh+++++++s+++   k+vsGs+d+ + vwd +t q le  l+ghdg v+cv
   Q: 871  VWDLVGDREDAgFFISGSTDCSVKIWDPSlrGSELRATLKGHTRTIRAISSDR--GKVVSGSDDQSVLVWDKQTTQLLE-ELKGHDGPVSCV 959
           444444433336**************766669*********************..***********************9.************ PP
   S: 144  vvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs 231
           ++ + g  + ++s D+tv++Wd++t++++ t      ++v ++++d+n   l+++++d   ++wd+++++ +++l ght++++s+r+ 
   Q: 960  RTLS-GERVLTASHDGTVKMWDVRTDRCVATVGR-CSSAVLCMEYDDNVGVLAAAGRDVVANIWDIRASRQMHKLSGHTQWIRSIRMV 1045
           **99.99*************************66.99************************************************986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSRIFEYFVV CGIGPEIRTM DGNKGYHGTG CLYLPSLLDQ YPPPNHTLYP SPPPQLSTCV 60
LPAGVEFYSS GFDSNDPASF PRSYPIVLTE GDGSKIYVSC ISFRDPVCED IAEAYRIQAN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTATGAATTG AAGTTTAATG TTTATTTTAT TTCTGGGTAC ATTGCATAAT GCACACTAAG 60
AATTTTCATT TCTCTGGCTT TCGTTTCTTT GTTTACCTAA TAAATTCCCG AACTGGAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR005112--dDENN_dom
IPR001194--DENN_dom
IPR020472--G-protein_beta_WD-40_rep
IPR005113--uDENN_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50947--DDENN
PS50211--DENN
PS50946--UDENN
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02141--DENN
PF03456--uDENN
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00801--dDENN
SM00799--DENN
SM00800--uDENN
SM00320--WD40

KEGG

gmx:100818305

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002593	Amborella trichopoda	77.45	0.00e+00	1806.00
IUUC-Aly-005508	Arabidopsis lyrata	73.48	0.00e+00	1750.00
IUUC-Ath-007614	Arabidopsis thaliana	73.06	0.00e+00	1760.00
IUUC-Bdi-014863	Brachypodium distachyon	71.79	0.00e+00	1748.00
IUUC-Bol-015997	Brassica oleracea	73.48	0.00e+00	1751.00
IUUC-Bra-017065	Brassica rapa	73.48	0.00e+00	1750.00
IUUC-Hvu-047377	Hordeum vulgare	81.01	9.00e-159	552.00
IUUC-Lpe-051109	Leersia perrieri	72.48	0.00e+00	1667.00
IUUC-Mtr-058651	Medicago truncatula	91.56	0.00e+00	2184.00
IUUC-Mac-065420	Musa acuminata	75.56	0.00e+00	1808.00
IUUC-Ncr-068688	Neurospora crassa	30.04	2.00e-26	114.00
IUUC-Oba-075961	Oryza barthii	69.43	0.00e+00	1304.00
IUUC-Obr-076806	Oryza brachyantha	72.83	0.00e+00	1785.00
IUUC-Ogu-078716	Oryza glumaepatula	69.03	0.00e+00	1606.00
IUUC-Oin-079809	Oryza indica	61.30	0.00e+00	1343.00
IUUC-Olo-080386	Oryza longistaminata	68.95	0.00e+00	1672.00
IUUC-Ome-081107	Oryza meridionalis	71.00	0.00e+00	1688.00
IUUC-Oni-082213	Oryza nivara	66.91	0.00e+00	1553.00
IUUC-Opu-083850	Oryza punctata	67.49	0.00e+00	1527.00
IUUC-Oru-084982	Oryza rufipogon	71.51	0.00e+00	1631.00
IUUC-Osa-086141	Oryza sativa	73.56	0.00e+00	1752.00
IUUC-Olu-087744	Ostreococcus lucimarinus	32.49	2.00e-42	168.00
IUUC-Ppa-095259	Physcomitrella patens	53.87	0.00e+00	1274.00
IUUC-Pop-099233	Populus trichocarpa	80.53	0.00e+00	1934.00
IUUC-Ppe-101883	Prunus persica	80.20	0.00e+00	1588.00
IUUC-Smo-109523	Selaginella moellendorffii	57.85	0.00e+00	1389.00
IUUC-Sit-109736	Setaria italica	73.52	0.00e+00	1792.00
IUUC-Sly-111483	Solanum lycopersicum	79.92	0.00e+00	1922.00
IUUC-Sbi-113820	Sorghum bicolor	73.11	0.00e+00	1779.00
IUUC-Tca-121657	Theobroma cacao	82.86	0.00e+00	1956.00
IUUC-Tae-124598	Triticum aestivum	70.60	0.00e+00	1742.00
IUUC-Tur-126080	Triticum urartu	69.50	0.00e+00	1119.00
IUUC-Vvi-131550	Vitis vinifera	83.29	0.00e+00	1959.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence