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Tag Content
iUUCD ID IUUC-Sha-107045
Ensembl Protein ID ENSSHAP00000014543.1
UniProt Accession G3WGI8; G3WGI8_SARHA
Genbank Protein ID ENSSHAP00000014543
Protein Name Presenilin
Genbank Nucleotide ID AEFK01012877
Gene Name PSEN1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSHAG00000012415.1 ENSSHAT00000014665.1 ENSSHAP00000014543.1
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/Alpha-Helix/CUE 1.60e-08 34.6 274 312
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/CUE

   S: 2    letaleqLkeiFPnldysviqvvLeantgsleaavnnLL 40
    +eta+e+++++FP+l+ys+++v+L++++ +++a+ +
   Q: 274 VETAQERNETLFPALIYSSTMVWLVNMAEGDPEAQRRVS 312
    89***************************9999987765 PP
   

Organism Sarcophilus harrisii
Functional Description
(View)

Functional Description



     Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
Protein Sequence
(Fasta)
MTELSAPLPY FQNAQMTEDS HMSNTVRSQN DGRERQRHEH SERRRHGNPE SETNGQPQGG 60
TRQVVEHDDE EDEELTLKYG AKHVIMLFVP VTLCMVVVVA TIKSVSFYTR KDGQLIYTPF 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Sha-107045|UBD,CUE|Sarcophilus harrisii
Please wait for a moment...
Nucleotide Sequence
(Fasta)
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNCA CTGCGGCCGT GCCGGAAATT 60
ACGATAGATA AAGCGGCCGG GAGGCGCCCG GGAACCGGAA GCTACGGCGG CCGGGAGATC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Sha-107045|UBD,CUE|Sarcophilus harrisii
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0333--Golgi apparatus
KW-0378--Hydrolase
KW-0472--Membrane
KW-0914--Notch signaling pathway
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR002031--Pept_A22A_PS1
IPR001108--Peptidase_A22A
IPR006639--Preselin/SPP

Pfam

PF01080--Presenilin

PRINTS

PR01072--PRESENILIN
PR01073--PRESENILIN1

SMART

SM00730--PSN

Gene Ontology

GO:0016235--C:aggresome
GO:0030424--C:axon
GO:0005938--C:cell cortex
GO:0030054--C:cell junction
GO:0005813--C:centrosome
GO:0035253--C:ciliary rootlet
GO:0031410--C:cytoplasmic vesicle
GO:0043198--C:dendritic shaft
GO:0005789--C:endoplasmic reticulum membrane
GO:0070765--C:gamma-secretase complex
GO:0000139--C:Golgi membrane
GO:0030426--C:growth cone
GO:0005887--C:integral component of plasma membrane
GO:0000776--C:kinetochore
GO:0045121--C:membrane raft
GO:0005739--C:mitochondrion
GO:0043025--C:neuronal cell body
GO:0005640--C:nuclear outer membrane
GO:0098793--C:presynapse
GO:0005791--C:rough endoplasmic reticulum
GO:0005790--C:smooth endoplasmic reticulum
GO:0042500--F:aspartic endopeptidase activity, intramembrane cleaving
GO:0005262--F:calcium channel activity
GO:0000186--P:activation of MAPKK activity
GO:0000045--P:autophagosome assembly
GO:0034205--P:beta-amyloid formation
GO:0001568--P:blood vessel development
GO:0048854--P:brain morphogenesis
GO:0021870--P:Cajal-Retzius cell differentiation
GO:0001708--P:cell fate specification
GO:0006974--P:cellular response to DNA damage stimulus
GO:0021795--P:cerebral cortex cell migration
GO:0015871--P:choline transport
GO:0021904--P:dorsal/ventral neural tube patterning
GO:0030326--P:embryonic limb morphogenesis
GO:0050673--P:epithelial cell proliferation
GO:0001947--P:heart looping
GO:0002244--P:hematopoietic progenitor cell differentiation
GO:0035556--P:intracellular signal transduction
GO:0015813--P:L-glutamate transport
GO:0006509--P:membrane protein ectodomain proteolysis
GO:0007613--P:memory
GO:0006839--P:mitochondrial transport
GO:0043011--P:myeloid dendritic cell differentiation
GO:2001234--P:negative regulation of apoptotic signaling pathway
GO:0050771--P:negative regulation of axonogenesis
GO:0007175--P:negative regulation of epidermal growth factor-activated receptor activity
GO:2000059--P:negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0051444--P:negative regulation of ubiquitin-protein transferase activity
GO:0051402--P:neuron apoptotic process
GO:0048666--P:neuron development
GO:0001764--P:neuron migration
GO:0007220--P:Notch receptor processing
GO:0007219--P:Notch signaling pathway
GO:0043065--P:positive regulation of apoptotic process
GO:0050820--P:positive regulation of coagulation
GO:0060999--P:positive regulation of dendritic spine development
GO:0043406--P:positive regulation of MAP kinase activity
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0001921--P:positive regulation of receptor recycling
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0009791--P:post-embryonic development
GO:0006486--P:protein glycosylation
GO:0016485--P:protein processing
GO:0015031--P:protein transport
GO:0060828--P:regulation of canonical Wnt signaling pathway
GO:0043393--P:regulation of protein binding
GO:0060075--P:regulation of resting membrane potential
GO:0048167--P:regulation of synaptic plasticity
GO:0051966--P:regulation of synaptic transmission, glutamatergic
GO:0006979--P:response to oxidative stress
GO:0016337--P:single organismal cell-cell adhesion
GO:0048705--P:skeletal system morphogenesis
GO:0043589--P:skin morphogenesis
GO:0051563--P:smooth endoplasmic reticulum calcium ion homeostasis
GO:0001756--P:somitogenesis
GO:0016080--P:synaptic vesicle targeting
GO:0002286--P:T cell activation involved in immune response
GO:0050852--P:T cell receptor signaling pathway
GO:0048538--P:thymus development

KEGG shr:100914418
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000686 Aegilops tauschii 33.11 4.00e-22 100.00
IUUC-Aml-001648 Ailuropoda melanoleuca 89.07 1.00e-155 541.00
IUUC-Atr-003039 Amborella trichopoda 31.22 8.00e-38 150.00
IUUC-Apl-003727 Anas platyrhynchos 83.12 0.00e+00 632.00
IUUC-Aca-004582 Anolis carolinensis 80.55 0.00e+00 628.00
IUUC-Aly-005455 Arabidopsis lyrata 58.82 1.00e-17 84.00
IUUC-Ath-006730 Arabidopsis thaliana 32.56 8.00e-18 84.70
IUUC-Ame-011500 Astyanax mexicanus 73.71 2.00e-151 528.00
IUUC-Bta-013026 Bos taurus 84.17 0.00e+00 663.00
IUUC-Bdi-014196 Brachypodium distachyon 32.89 5.00e-29 122.00
IUUC-Bol-015841 Brassica oleracea 35.28 3.00e-31 129.00
IUUC-Cel-018553 Caenorhabditis elegans 52.74 7.00e-97 347.00
IUUC-Cja-019994 Callithrix jacchus 89.86 0.00e+00 634.00
IUUC-Cfa-020074 Canis familiaris 88.30 0.00e+00 687.00
IUUC-Cpo-022237 Cavia porcellus 87.78 0.00e+00 654.00
IUUC-Cre-022747 Chlamydomonas reinhardtii 34.70 5.00e-29 122.00
IUUC-Csa-023537 Chlorocebus sabaeus 88.51 0.00e+00 709.00
IUUC-Cho-024735 Choloepus hoffmanni 78.94 0.00e+00 631.00
IUUC-Cin-025780 Ciona intestinalis 63.00 2.00e-126 445.00
IUUC-Csv-025967 Ciona savignyi 62.94 9.00e-120 423.00
IUUC-Dre-028689 Danio rerio 74.12 2.00e-147 515.00
IUUC-Dno-029758 Dasypus novemcinctus 88.51 0.00e+00 685.00
IUUC-Dor-030609 Dipodomys ordii 67.23 7.00e-156 543.00
IUUC-Dme-031929 Drosophila melanogaster 57.00 5.00e-112 397.00
IUUC-Ete-032487 Echinops telfairi 77.25 2.00e-76 279.00
IUUC-Eeu-035134 Erinaceus europaeus 87.01 5.00e-133 466.00
IUUC-Fca-036243 Felis catus 88.30 0.00e+00 683.00
IUUC-Fal-036600 Ficedula albicollis 82.88 0.00e+00 630.00
IUUC-Gmo-039665 Gadus morhua 70.79 1.00e-115 409.00
IUUC-Gga-040993 Gallus gallus 84.14 0.00e+00 645.00
IUUC-Gac-042342 Gasterosteus aculeatus 66.74 9.00e-130 456.00
IUUC-Gma-043822 Glycine max 38.66 4.00e-25 108.00
IUUC-Ggo-044859 Gorilla gorilla 85.71 6.00e-150 523.00
IUUC-Hsa-046822 Homo sapiens 88.30 0.00e+00 708.00
IUUC-Hvu-047141 Hordeum vulgare 34.97 9.00e-26 111.00
IUUC-Itr-048420 Ictidomys tridecemlineatus 88.85 2.00e-145 508.00
IUUC-Lch-049946 Latimeria chalumnae 69.70 8.00e-148 516.00
IUUC-Loc-052469 Lepisosteus oculatus 64.92 5.00e-143 501.00
IUUC-Laf-053979 Loxodonta africana 86.74 3.00e-173 600.00
IUUC-Mcc-055682 Macaca mulatta 88.30 0.00e+00 708.00
IUUC-Meu-056004 Macropus eugenii 83.45 5.00e-173 600.00
IUUC-Mtr-058392 Medicago truncatula 35.08 3.00e-30 126.00
IUUC-Mga-059466 Meleagris gallopavo 83.30 0.00e+00 642.00
IUUC-Mmr-061538 Microcebus murinus 71.28 3.00e-148 517.00
IUUC-Mdo-062122 Monodelphis domestica 96.39 0.00e+00 765.00
IUUC-Mmu-063176 Mus musculus 85.96 0.00e+00 671.00
IUUC-Mpu-065927 Mustela putorius furo 86.81 0.00e+00 670.00
IUUC-Mlu-067079 Myotis lucifugus 86.81 0.00e+00 704.00
IUUC-Nle-070180 Nomascus leucogenys 88.30 0.00e+00 708.00
IUUC-Opr-070847 Ochotona princeps 81.68 7.00e-179 619.00
IUUC-Ont-071846 Oreochromis niloticus 76.54 1.00e-147 516.00
IUUC-Oan-072783 Ornithorhynchus anatinus 83.79 6.00e-137 479.00
IUUC-Ocu-074527 Oryctolagus cuniculus 87.05 0.00e+00 694.00
IUUC-Oba-075256 Oryza barthii 32.02 2.00e-22 99.80
IUUC-Obr-076302 Oryza brachyantha 41.38 2.00e-16 80.10
IUUC-Ogl-077097 Oryza glaberrima 30.66 5.00e-25 108.00
IUUC-Ogu-078570 Oryza glumaepatula 31.47 2.00e-25 109.00
IUUC-Olo-080484 Oryza longistaminata 34.04 1.00e-18 86.70
IUUC-Ome-081814 Oryza meridionalis 31.11 8.00e-24 104.00
IUUC-Oru-084618 Oryza rufipogon 31.22 7.00e-25 108.00
IUUC-Osa-085602 Oryza sativa 31.22 6.00e-26 111.00
IUUC-Olu-087811 Ostreococcus lucimarinus 35.93 7.00e-45 174.00
IUUC-Oar-090348 Ovis aries 86.17 0.00e+00 704.00
IUUC-Ptr-091060 Pan troglodytes 88.30 0.00e+00 708.00
IUUC-Pan-091855 Papio anubis 82.59 0.00e+00 630.00
IUUC-Psi-093505 Pelodiscus sinensis 83.72 0.00e+00 642.00
IUUC-Pfo-097396 Poecilia formosa 71.65 3.00e-155 541.00
IUUC-Pab-098591 Pongo abelii 87.45 0.00e+00 694.00
IUUC-Pca-101029 Procavia capensis 85.74 0.00e+00 649.00
IUUC-Ppe-101495 Prunus persica 30.94 1.00e-36 147.00
IUUC-Pva-102244 Pteropus vampyrus 81.49 0.00e+00 628.00
IUUC-Rno-105861 Rattus norvegicus 86.65 0.00e+00 664.00
IUUC-Smo-109325 Selaginella moellendorffii 35.84 1.00e-37 150.00
IUUC-Stu-112433 Solanum tuberosum 34.84 6.00e-34 138.00
IUUC-Sar-113169 Sorex araneus 83.94 6.00e-134 470.00
IUUC-Sbi-114305 Sorghum bicolor 33.23 1.00e-25 110.00
IUUC-Ssc-115766 Sus scrofa 87.02 0.00e+00 678.00
IUUC-Tgu-116469 Taeniopygia guttata 85.88 2.00e-138 484.00
IUUC-Tru-117732 Takifugu rubripes 76.71 2.00e-147 514.00
IUUC-Tsy-119624 Tarsius syrichta 80.85 0.00e+00 640.00
IUUC-Tni-119852 Tetraodon nigroviridis 70.62 1.00e-139 489.00
IUUC-Tca-121865 Theobroma cacao 32.84 4.00e-36 145.00
IUUC-Tae-123984 Triticum aestivum 34.75 2.00e-25 109.00
IUUC-Tur-126237 Triticum urartu 34.54 3.00e-25 109.00
IUUC-Tbe-128148 Tupaia belangeri 78.10 4.00e-154 536.00
IUUC-Ttr-128793 Tursiops truncatus 86.17 0.00e+00 658.00
IUUC-Vpa-130625 Vicugna pacos 71.00 2.00e-145 508.00
IUUC-Vvi-131312 Vitis vinifera 34.43 1.00e-35 144.00
IUUC-Xtr-131790 Xenopus tropicalis 78.81 1.00e-161 562.00
Created Date 25-Jun-2017

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