iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-10	42.3	89	133

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdg.plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+df  +d+  ++++C H+fh+ Cl +w     + +++ +CPlCr
   Q: 89   CAVCLYDFenDDEiRRLTNCRHIFHRGCLDRW----MMGYNQMTCPLCR 133
           ********77333355799*************....78**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGFPVGYSEL LLPKIFFYLL SFLGLIRKLI STMFKIIGLP DFLEPEPVST SWPDPPPTLT 60
KPDSAAILAG EMLPVVRFSD INRPESECCA VCLYDFENDD EIRRLTNCRH IFHRGCLDRW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTAAAACC CTTATTTAAA TTATATAGAA AAAAAAAAGG TCAAGTAGTC TTCTATTATT 60
TACTAGTATA ACCTCTAGAA ACATCATCAC CACATTCCTG GCTAATATCC TTCATCTAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0009737--P:response to abscisic acid

KEGG

ath:AT1G63840

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006338	Arabidopsis lyrata	93.37	9.00e-90	321.00
IUUC-Afu-009114	Aspergillus fumigatus	48.28	7.00e-13	68.90
IUUC-Ani-009491	Aspergillus nidulans	36.00	6.00e-12	65.90
IUUC-Ang-009544	Aspergillus niger	47.37	4.00e-13	69.70
IUUC-Ate-010250	Aspergillus terreus	44.44	2.00e-12	67.80
IUUC-Bol-016293	Brassica oleracea	80.52	5.00e-61	226.00
IUUC-Bra-018086	Brassica rapa	80.00	1.00e-61	228.00
IUUC-Nfi-068528	Neosartorya fischeri	46.55	2.00e-12	67.80
IUUC-Oan-073689	Ornithorhynchus anatinus	30.33	1.00e-08	53.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence