iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016746

Ensembl Protein ID

Bra016067.1-P

UniProt Accession

M4DHU0; M4DHU0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra016067	Bra016067.1	Bra016067.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.30e-07	31.1	127	169

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+ +   ++  ++lp C H fh +C+ +w       + + +CP+Cr
   Q: 127  CAICLSALvkgDK-ARLLPkCSHSFHVECIDMW------FQSHSTCPICR 169
           ******9988544.999999*************......9999******8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDDDGSAHSS LFGDLSTEEV TSKIILTAVI VLFMAVLFVL ILHLYAKLYW WRLDHHLQQQ 60
EQEQELEQED QSPITPPVIT TRRQRRRFIF VPGQDALSNT GGLTPFELSS LPIVFFRQDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGATG ATGGATCTGC TCATAGCTCA CTGTTCGGAG ACCTATCCAC CGAAGAGGTC 60
ACAAGCAAGA TCATCCTCAC AGCAGTCATT GTTCTGTTCA TGGCGGTTCT CTTCGTCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005451	Arabidopsis lyrata	76.97	4.00e-106	377.00
IUUC-Ath-007315	Arabidopsis thaliana	73.77	6.00e-104	370.00
IUUC-Bta-012330	Bos taurus	43.42	1.00e-15	77.80
IUUC-Bol-016205	Brassica oleracea	92.93	1.00e-107	382.00
IUUC-Gma-044376	Glycine max	47.53	3.00e-30	125.00
IUUC-Hvu-047333	Hordeum vulgare	39.83	2.00e-24	105.00
IUUC-Opu-083253	Oryza punctata	38.52	2.00e-17	82.40
IUUC-Sit-109688	Setaria italica	43.21	3.00e-15	75.50
IUUC-Tae-123534	Triticum aestivum	34.86	6.00e-25	107.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence