iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006273

UUCD1 version

UUC-ArL-01001

Ensembl Protein ID

fgenesh2_kg.2__14__AT1G64610.1

UniProt Accession

D7KS76; D7KS76_ARALL

Genbank Protein ID

EFH62594.1

Protein Name

WD-40 repeat family protein

Genbank Nucleotide ID

GL348714

Gene Name

ARALYDRAFT_474884

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.2__14__AT1G64610.1	fgenesh2_kg.2__14__AT1G64610.1	fgenesh2_kg.2__14__AT1G64610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-27	94.2	358	394

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           H++ vtc+af   +d++++sGs Dg++++WD++++++
   Q: 358  HNNFVTCVAFnpvDDNYFISGSIDGKVRIWDVTRCRV 394
           8899********766*****************99876 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGTRGDEEDE DRFFDASEHS SDFGLHLWTN TPDSVSSRRR KFLQSMGFSF KQTATDDDDS 60
EDDDLEPSHS DSNLVSQVVN LSSAVDLLVR NESTTSSGFD TSSAEEDTDD QTLLSRNHSS 120

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Nucleotide Sequence
(Fasta)

TTGATAAAGA AGAGAGTCTC CCTCCCTCTC TCTAAAACCC TTTCAAAGAT TGAAACTTTT 60
GTGTTTACTC TTAAACCAAA AGGGTTTCAA TTGAAAGAGT GCCTATCCAA CCGACACATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_474884

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007069	Arabidopsis thaliana	89.52	0.00e+00	1083.00
IUUC-Bol-015863	Brassica oleracea	75.55	0.00e+00	744.00
IUUC-Bra-017217	Brassica rapa	74.34	0.00e+00	718.00
IUUC-Cme-027130	Cyanidioschyzon merolae	32.73	1.00e-45	177.00
IUUC-Gma-042979	Glycine max	51.53	5.00e-136	477.00
IUUC-Ppe-101343	Prunus persica	49.72	8.00e-142	496.00
IUUC-Sly-111646	Solanum lycopersicum	50.10	2.00e-135	476.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence