iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__1832__AT3G16650.1	fgenesh2_kg.3__1832__AT3G16650.1	fgenesh2_kg.3__1832__AT3G16650.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.90e-40	133.8	168	204
UBD/Beta-Prp	5.40e-56	190.6	165	286

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           gH ++v+++af  s+  +++Gs D tik+WD+ tgvl
   Q: 168  GHLGWVRSVAFdpSNEWFCTGSADRTIKIWDVATGVL 204
           8***********54499******************97 PP

UBD/Beta-Prp

   S: 132  tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwd 208
           + +gh g+v++v+++p++  + +Gs+Drt+++Wd++tg l  tltg h ++v+ l+++   +++ s+++d++vk wd
   Q: 165  VIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTG-HIGQVRGLAVSNRHTYMFSAGDDKQVKCWD 240
           568******************************************9.****************************** PP
   S: 209  lqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsg 254
           l++++++r+++gh   v++++++p  + +++g+ D + r+Wd+r++
   Q: 241  LEQNKVIRSYHGHLHGVYCLALHPTLDVILTGGRDSVCRVWDIRTK 286
           *******************************************986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MTMLSLSTEV DTQSLKKLSL KSVTRARELF SPVHGQFPPP DPESKRIRLC HKIQVSFGGV 60
EPASKPTRSA EHNSEKTAPS NALALPGPEG SKELRKGTTE KALVVGPTLP SRDLNNTGNP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTATTTCCC TCTCTTCTCT CCGTCTCTTT CGTTCTGATT CTGATTGTTC GTGTAAAACC 60
CTAGATGACG ATGCTAAGTT TGAGCACGGA AGTCGATACT CAGTCACTGA AAAAACTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_479131

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence