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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-006746
UUCD1 version UUC-ArT-01245
Ensembl Protein ID AT3G05200.1
UniProt Accession Q8RXX9; Q4FE31; Q9MA99; Q9XF65; ATL6_ARATH
Genbank Protein ID AAD33584.1; AAZ14076.1; AAF27026.1; AEE74204.1; AAL86301.1
Protein Name E3 ubiquitin-protein ligase ATL6; RING-H2 finger protein ATL6; RING-type E3 ubiquitin transferase ATL6
Genbank Nucleotide ID AF132016; DQ086860; AC009177; CP002686; AY080617
Gene Name ATL6; At3g05200; T12H1.17
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G05200 AT3G05200.1 AT3G05200.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
HINT
Post-translational Modifications (PTMs)
dbPPTdbPTMUniProt
Protein Expression/Proteomics
GPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
E3 activity/RING/RING RING 16339806; 21203445
Classification
Family E-value Score Start End
E3 activity/RING/RING 1.00e-08 36.4 128 170
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f  ++ +++lp C Hvfh +C+ +w         + +CP+Cr
   Q: 128  CAICLNEFedDETLRLLPkCDHVFHPHCIDAW------LEAHVTCPVCR 170
           ********6544499999**************......**********8 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     E3 ubiquitin-protein ligase able to catalyze polyubiquitination with ubiquitin-conjugating enzyme E2 UBC8 in vitro. May be involved in the plant C/N response and the early steps of the plant defense signaling pathway.
 E3 ubiquitin-protein ligase able to catalyze polyubiquitination with ubiquitin-conjugating enzyme E2 UBC8 in vitro. May be involved in the plant C/N response and the early steps of the plant defense signaling pathway.
Protein Sequence
(Fasta)
MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL 60
FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL DVSVVETFPT FLYSDVKTQK 120
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Protein Fasta Sequence


>IUUC-Ath-006746|E3,RING|Arabidopsis thaliana
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Nucleotide Sequence
(Fasta)
TTCGACATAA TTTTACCAAT TAGGCAACGA CTTTCATTAC ACAAAATTGC GGAAACTATA 60
CAAAATTAGC CATGGATAAA AATGGAAAAT AACAAACCGA AACTTGGCTG TAACAAAATC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006746|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-0597--Phosphoprotein
KW-0611--Plant defense
KW-1185--Reference proteome
KW-0732--Signal
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50089--ZF_RING_2
Pfam

PF13639--zf-RING_2
SMART

SM00184--RING
Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0009816--P:defense response to bacterium, incompatible interaction
GO:0009814--P:defense response, incompatible interaction
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination
GO:0010200--P:response to chitin
KEGG ath:AT3G05200
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000107 Aegilops tauschii 39.30 3.00e-30 124.00
IUUC-Atr-002716 Amborella trichopoda 42.77 2.00e-56 212.00
IUUC-Aly-005713 Arabidopsis lyrata 97.24 0.00e+00 706.00
IUUC-Bdi-014474 Brachypodium distachyon 58.90 1.00e-44 172.00
IUUC-Bol-016322 Brassica oleracea 82.28 2.00e-166 578.00
IUUC-Bra-017990 Brassica rapa 80.70 8.00e-158 548.00
IUUC-Gma-043536 Glycine max 47.62 1.00e-57 216.00
IUUC-Hvu-047493 Hordeum vulgare 41.60 3.00e-50 191.00
IUUC-Lpe-051270 Leersia perrieri 54.39 1.00e-46 179.00
IUUC-Mtr-058791 Medicago truncatula 47.77 1.00e-57 216.00
IUUC-Oba-075528 Oryza barthii 53.90 2.00e-42 166.00
IUUC-Obr-076839 Oryza brachyantha 56.77 8.00e-47 180.00
IUUC-Ogl-076953 Oryza glaberrima 53.25 6.00e-43 167.00
IUUC-Ogu-078122 Oryza glumaepatula 53.25 9.00e-43 166.00
IUUC-Oin-079189 Oryza indica 53.25 7.00e-43 167.00
IUUC-Ome-081499 Oryza meridionalis 52.17 1.00e-41 163.00
IUUC-Oni-082648 Oryza nivara 53.25 9.00e-43 167.00
IUUC-Opu-083745 Oryza punctata 42.81 3.00e-45 175.00
IUUC-Oru-084417 Oryza rufipogon 53.25 1.00e-42 166.00
IUUC-Osa-085388 Oryza sativa 53.25 6.00e-43 167.00
IUUC-Pop-098838 Populus trichocarpa 49.13 5.00e-71 260.00
IUUC-Ppe-101166 Prunus persica 45.85 1.00e-67 248.00
IUUC-Sit-109787 Setaria italica 60.00 3.00e-51 194.00
IUUC-Sbi-114136 Sorghum bicolor 63.36 1.00e-46 180.00
IUUC-Tca-120966 Theobroma cacao 46.27 1.00e-71 262.00
IUUC-Tae-124246 Triticum aestivum 59.85 1.00e-44 173.00
IUUC-Tur-126779 Triticum urartu 38.13 4.00e-35 140.00
IUUC-Vvi-131515 Vitis vinifera 45.18 1.00e-64 239.00
IUUC-Yli-134336 Yarrowia lipolytica 37.23 2.00e-12 67.00
Created Date 25-Jun-2017

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