iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114257

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G174900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g023560	Sb09g023560.1	Sb09g023560.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.70e-56	190.6	5	139
UBD/UBC-like/UBD_UBC	7.00e-74	247.3	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWspal 96
           R+ kelk+l+kdpp+++sa+p  e d+++w+++i+Gp+d+pY+ggvF ++i+fp+dYPfkPPkv+f tk+fhPn+++nG++Cl+ilk  e+Wspal
   Q: 5    RILKELKDLQKDPPTSCSAGPAGE-DMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINSNGSICLDILK--EQWSPAL 97
           899*********************.9************************************************************9..******* PP
   S: 97   svesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           ++++vllsi+sll++pnp++pl  e+a+++k++r +y++++r
   Q: 98   TISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRPKYESTAR 139
           **************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqwsaaltls 96
           ri kelkdl++d+++ +sa++ ++d+f+++ati+gppdspy ggvf ++i++p dypfkppkv+f tk++hpninsngsicldil++qws+alt+s
   Q: 5    RILKELKDLQKDPPTSCSAGPAGEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINSNGSICLDILKEQWSPALTIS 100
           899********************************************************************************************* PP
   S: 97   kvllslcslladaepddplvaeiariyktdkekykriarewt 138
           kvlls+csll+d++pddplv+eia++yktd+ ky+ +ar wt
   Q: 101  KVLLSICSLLTDPNPDDPLVPEIAHMYKTDRPKYESTARSWT 142
           *****************************************8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MASKRILKEL KDLQKDPPTS CSAGPAGEDM FHWQATIMGP PDSPYAGGVF LVNIHFPPDY 60
PFKPPKVSFK TKVFHPNINS NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCGCCCTCG GGTGAGGACA CCGGGATCCC GCGGCTCGCG CACGAGCACC ACGAACTTTC 60
TTCTCCGCCG TCCCACTACA CCTCCCGTCG CGCCGCCGAG CGACGGCGCG CATCCGCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

sbi:SORBI_09g023560

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000292	Aegilops tauschii	98.65	6.00e-85	305.00
IUUC-Aly-006542	Arabidopsis lyrata	94.59	6.00e-82	295.00
IUUC-Ath-007224	Arabidopsis thaliana	94.59	6.00e-82	295.00
IUUC-Bdi-014832	Brachypodium distachyon	98.65	7.00e-85	304.00
IUUC-Mvi-060397	Microbotryum violaceum	78.91	6.00e-70	254.00
IUUC-Mac-064668	Musa acuminata	93.92	1.00e-82	298.00
IUUC-Smo-108911	Selaginella moellendorffii	95.95	3.00e-83	298.00
IUUC-Sit-110205	Setaria italica	99.32	2.00e-85	306.00
IUUC-Tae-122799	Triticum aestivum	98.65	7.00e-85	304.00
IUUC-Uma-129648	Ustilago maydis	80.95	7.00e-71	258.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence