iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109293

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377567

Gene Name

SELMODRAFT_404192

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_404192	EFJ35886	EFJ35886

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.70e-06	27.5	139	202

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg....plvlpCgHvfhadCl.qkw.............pglknssskefrCPlCr 46
           C+iC+e +k +     l+ pCgH+f+a+   +++                + +++++ +CP+Cr
   Q: 139  CPICFELMKSPtyspILLYPCGHTFCAKVCtNRIingdllvprlgqcLEIHTVTNRKKTCPYCR 202
           ********885333344688******998668888999999999999777778999999****8 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MVANILTKPL DKSTFQGLRK MLGMEPDKYP PILQHSTIGV LPKRLVIAIF HLSMVENHTL 60
QRSKPSFTIG NDPGTISNPG LLEFKLGDIP CLPGSIVSAV GRSYGDQDMA DSDAPWPLLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTAGCAA ACATCCTCAC CAAGCCCCTA GACAAATCAA CATTTCAGGG GCTGAGGAAA 60
ATGCTAGGCA TGGAACCAGG TCAGATTTGA GAAAGAGCTC TCGGCTGAGG GGGAGTGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR033275--MARCH-like
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2
PS51292--ZF_RING_CH

Pfam

PF12906--RINGv
PF13445--zf-RING_UBOX

SMART

SM00744--RINGv

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

smo:SELMODRAFT_404192

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005684	Arabidopsis lyrata	38.75	7.00e-11	61.20
IUUC-Ath-007188	Arabidopsis thaliana	38.75	9.00e-11	60.80
IUUC-Bol-016247	Brassica oleracea	41.79	2.00e-10	60.10
IUUC-Bra-017315	Brassica rapa	36.36	1.00e-10	60.50
IUUC-Cre-022560	Chlamydomonas reinhardtii	45.45	2.00e-04	40.40
IUUC-Gac-042361	Gasterosteus aculeatus	35.16	2.00e-06	46.20
IUUC-Gma-043479	Glycine max	28.19	4.00e-11	62.00
IUUC-Mtr-058438	Medicago truncatula	43.28	4.00e-10	58.90
IUUC-Mac-065242	Musa acuminata	43.08	2.00e-11	62.80
IUUC-Ppa-095862	Physcomitrella patens	40.85	3.00e-38	150.00
IUUC-Pop-099336	Populus trichocarpa	44.12	5.00e-11	62.00
IUUC-Ppe-101419	Prunus persica	44.62	2.00e-11	62.80
IUUC-Sly-111220	Solanum lycopersicum	41.27	4.00e-10	58.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence