iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pgr-103525

Ensembl Protein ID

EFP91792

UniProt Accession

E3L5G7; E3L5G7_PUCGT

Genbank Protein ID

EFP91792.2

Protein Name

Ribosome biogenesis protein ERB1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

DS178352

Gene Name

ERB1; PGTG_17792

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGTG_17792	EFP91792	EFP91792

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-10	40.7	508	541

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           +++ ++  ++   +++GsdDg+++vW+ + g++ 
   Q: 508  RIRTVSIdPTgMWVATGSDDGQVRVWECKVGRCA 541
           57777778665779*************9999986 PP

Organism

Puccinia graminis

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MAPNPSTKPN KKSTKRKNTE PKPSSSQTQQ KSSSKSEPPR KNKTKKQTPK VEPVLLRSSP 60
PQVQEDSSSE SGEDIEEGPF PELFLSDDDG EENPVNGSKK EAVEELEDVV ENEEDDDEDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGAACCAT AACGAAAACC AGCCACTTCG ACCGAGCGAT GGCCCCCAAT CCATCAACCA 60
AACCAAACAA AAAATCAACC AAACGAAAGA ATACCGAGCC CAAGCCATCA TCTTCTCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0070180--F:large ribosomal subunit rRNA binding
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

pgr:PGTG_17792

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	40.00	5.00e-112	396.00
IUUC-Aml-001507	Ailuropoda melanoleuca	45.05	1.00e-150	525.00
IUUC-Atr-003141	Amborella trichopoda	40.18	8.00e-79	286.00
IUUC-Apl-003545	Anas platyrhynchos	43.17	2.00e-134	470.00
IUUC-Aly-005649	Arabidopsis lyrata	42.29	2.00e-137	481.00
IUUC-Ath-007625	Arabidopsis thaliana	42.93	6.00e-133	466.00
IUUC-Ago-007958	Ashbya gossypii	49.78	0.00e+00	632.00
IUUC-Acl-008344	Aspergillus clavatus	49.55	2.00e-167	581.00
IUUC-Afl-008616	Aspergillus flavus	49.55	7.00e-169	585.00
IUUC-Afu-009083	Aspergillus fumigatus	49.70	5.00e-162	563.00
IUUC-Ani-009365	Aspergillus nidulans	49.70	2.00e-170	591.00
IUUC-Ang-009796	Aspergillus niger	50.00	4.00e-169	586.00
IUUC-Aor-010015	Aspergillus oryzae	49.55	7.00e-169	585.00
IUUC-Ate-010537	Aspergillus terreus	50.07	1.00e-172	598.00
IUUC-Ame-011767	Astyanax mexicanus	48.12	1.00e-72	264.00
IUUC-Bgr-012286	Blumeria graminis	50.98	1.00e-175	607.00
IUUC-Bta-013569	Bos taurus	46.65	9.00e-160	555.00
IUUC-Bci-013820	Botrytis cinerea	48.35	7.00e-164	569.00
IUUC-Bdi-014477	Brachypodium distachyon	42.11	7.00e-134	469.00
IUUC-Bol-016099	Brassica oleracea	43.83	8.00e-140	489.00
IUUC-Bra-017174	Brassica rapa	43.67	2.00e-139	488.00
IUUC-Cel-018201	Caenorhabditis elegans	40.60	2.00e-124	437.00
IUUC-Cja-019009	Callithrix jacchus	40.10	5.00e-133	466.00
IUUC-Cfa-020173	Canis familiaris	44.39	2.00e-151	527.00
IUUC-Cpo-021796	Cavia porcellus	47.28	8.00e-162	562.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	41.51	5.00e-138	483.00
IUUC-Csa-023440	Chlorocebus sabaeus	46.33	2.00e-166	577.00
IUUC-Cin-025782	Ciona intestinalis	43.90	6.00e-157	546.00
IUUC-Csv-026352	Ciona savignyi	43.91	9.00e-152	528.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	42.38	8.00e-123	432.00
IUUC-Cne-027004	Cryptococcus neoformans	55.42	0.00e+00	821.00
IUUC-Cme-027242	Cyanidioschyzon merolae	37.50	2.00e-120	424.00
IUUC-Dre-028658	Danio rerio	45.84	5.00e-164	569.00
IUUC-Dno-028883	Dasypus novemcinctus	44.64	6.00e-162	562.00
IUUC-Dor-031031	Dipodomys ordii	45.92	2.00e-164	571.00
IUUC-Dse-031443	Dothistroma septosporum	47.88	3.00e-172	597.00
IUUC-Dme-031786	Drosophila melanogaster	42.64	9.00e-156	542.00
IUUC-Eca-033677	Equus caballus	47.76	1.00e-165	574.00
IUUC-Eeu-035310	Erinaceus europaeus	43.73	2.00e-124	437.00
IUUC-Fca-035888	Felis catus	46.01	5.00e-163	565.00
IUUC-Fal-037438	Ficedula albicollis	43.92	6.00e-123	432.00
IUUC-Fox-037973	Fusarium oxysporum	46.51	2.00e-171	593.00
IUUC-Fso-038187	Fusarium solani	46.81	8.00e-170	588.00
IUUC-Gmo-039114	Gadus morhua	43.06	3.00e-145	506.00
IUUC-Ggr-039746	Gaeumannomyces graminis	46.72	8.00e-174	602.00
IUUC-Gga-040631	Gallus gallus	46.04	8.00e-91	325.00
IUUC-Gac-042582	Gasterosteus aculeatus	43.33	5.00e-152	529.00
IUUC-Gma-044307	Glycine max	42.37	2.00e-128	451.00
IUUC-Ggo-045587	Gorilla gorilla	46.51	4.00e-168	583.00
IUUC-Hsa-046319	Homo sapiens	46.65	6.00e-168	582.00
IUUC-Hvu-047526	Hordeum vulgare	42.63	5.00e-129	453.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	46.81	1.00e-163	568.00
IUUC-Kpa-049221	Komagataella pastoris	46.50	4.00e-168	583.00
IUUC-Lch-049640	Latimeria chalumnae	47.01	1.00e-172	598.00
IUUC-Lpe-051135	Leersia perrieri	41.42	1.00e-123	435.00
IUUC-Loc-051930	Lepisosteus oculatus	46.84	2.00e-171	593.00
IUUC-Lma-053290	Leptosphaeria maculans	48.02	4.00e-174	603.00
IUUC-Laf-053903	Loxodonta africana	43.93	2.00e-140	491.00
IUUC-Mcc-055471	Macaca mulatta	46.33	1.00e-166	578.00
IUUC-Meu-056190	Macropus eugenii	47.22	2.00e-162	564.00
IUUC-Mor-057135	Magnaporthe oryzae	47.38	2.00e-164	570.00
IUUC-Mpo-057475	Magnaporthe poae	45.97	2.00e-159	554.00
IUUC-Mtr-058689	Medicago truncatula	37.38	2.00e-115	408.00
IUUC-Mla-059149	Melampsora laricipopulina	77.68	0.00e+00	1125.00
IUUC-Mga-059645	Meleagris gallopavo	43.27	4.00e-56	209.00
IUUC-Mvi-060485	Microbotryum violaceum	56.89	0.00e+00	809.00
IUUC-Mmr-061674	Microcebus murinus	44.85	1.00e-160	558.00
IUUC-Mdo-062973	Monodelphis domestica	47.06	5.00e-170	589.00
IUUC-Mmu-064180	Mus musculus	45.85	4.00e-163	566.00
IUUC-Mac-064535	Musa acuminata	40.22	2.00e-83	302.00
IUUC-Mpu-066406	Mustela putorius furo	47.37	2.00e-166	577.00
IUUC-Mlu-067795	Myotis lucifugus	47.44	2.00e-158	550.00
IUUC-Nfi-068516	Neosartorya fischeri	47.80	8.00e-155	539.00
IUUC-Ncr-068767	Neurospora crassa	49.47	6.00e-163	566.00
IUUC-Opr-071084	Ochotona princeps	42.07	1.00e-61	228.00
IUUC-Ont-071614	Oreochromis niloticus	44.90	1.00e-162	565.00
IUUC-Oba-075980	Oryza barthii	41.57	2.00e-122	431.00
IUUC-Obr-076799	Oryza brachyantha	44.65	2.00e-137	481.00
IUUC-Ogl-077134	Oryza glaberrima	44.03	4.00e-131	459.00
IUUC-Ogu-078655	Oryza glumaepatula	41.82	5.00e-124	436.00
IUUC-Oin-079654	Oryza indica	44.03	5.00e-131	459.00
IUUC-Olo-080706	Oryza longistaminata	41.97	6.00e-123	432.00
IUUC-Ome-081716	Oryza meridionalis	45.32	2.00e-73	268.00
IUUC-Oni-082508	Oryza nivara	41.26	1.00e-120	425.00
IUUC-Opu-083707	Oryza punctata	41.01	2.00e-118	417.00
IUUC-Oru-084453	Oryza rufipogon	41.97	6.00e-123	432.00
IUUC-Osa-085811	Oryza sativa	43.87	8.00e-131	459.00
IUUC-Ola-087361	Oryzias latipes	45.90	3.00e-163	566.00
IUUC-Oga-088015	Otolemur garnettii	45.69	3.00e-166	577.00
IUUC-Oar-090058	Ovis aries	53.89	3.00e-53	201.00
IUUC-Ptr-090631	Pan troglodytes	48.59	2.00e-69	254.00
IUUC-Pan-092306	Papio anubis	46.25	2.00e-165	574.00
IUUC-Pma-094622	Petromyzon marinus	47.54	8.00e-179	618.00
IUUC-Pno-094794	Phaeosphaeria nodorum	45.73	8.00e-164	568.00
IUUC-Ppa-095528	Physcomitrella patens	42.30	1.00e-88	319.00
IUUC-Pfo-096682	Poecilia formosa	42.55	4.00e-167	580.00
IUUC-Pab-097939	Pongo abelii	46.30	1.00e-149	521.00
IUUC-Pop-099043	Populus trichocarpa	42.68	9.00e-124	435.00
IUUC-Pca-100333	Procavia capensis	44.67	1.00e-159	555.00
IUUC-Ppe-102078	Prunus persica	39.56	2.00e-121	428.00
IUUC-Ptt-103929	Puccinia triticina	89.73	0.00e+00	1323.00
IUUC-Pte-104029	Pyrenophora teres	49.39	0.00e+00	630.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	49.24	0.00e+00	631.00
IUUC-Rno-105248	Rattus norvegicus	46.49	6.00e-165	572.00
IUUC-Sce-106381	Saccharomyces cerevisiae	49.35	0.00e+00	644.00
IUUC-Sha-106519	Sarcophilus harrisii	47.54	5.00e-169	585.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	45.20	1.00e-159	555.00
IUUC-Spo-108071	Schizosaccharomyces pombe	43.88	4.00e-150	523.00
IUUC-Smo-109604	Selaginella moellendorffii	42.81	9.00e-135	472.00
IUUC-Sit-110551	Setaria italica	42.79	7.00e-130	456.00
IUUC-Sly-110970	Solanum lycopersicum	44.44	1.00e-73	269.00
IUUC-Stu-112593	Solanum tuberosum	41.88	8.00e-135	472.00
IUUC-Sar-113123	Sorex araneus	44.92	3.00e-73	266.00
IUUC-Sbi-113945	Sorghum bicolor	42.00	2.00e-130	457.00
IUUC-Sre-115188	Sporisorium reilianum	48.26	0.00e+00	700.00
IUUC-Ssc-115352	Sus scrofa	46.51	3.00e-161	560.00
IUUC-Tru-117685	Takifugu rubripes	45.14	3.00e-165	573.00
IUUC-Tni-119982	Tetraodon nigroviridis	44.44	3.00e-159	553.00
IUUC-Tca-121664	Theobroma cacao	42.99	1.00e-136	478.00
IUUC-Tre-122229	Trichoderma reesei	47.52	7.00e-149	519.00
IUUC-Tvi-122576	Trichoderma virens	47.19	6.00e-154	536.00
IUUC-Tae-124110	Triticum aestivum	42.54	6.00e-121	426.00
IUUC-Tur-126781	Triticum urartu	38.50	1.00e-107	382.00
IUUC-Tme-127080	Tuber melanosporum	54.32	0.00e+00	693.00
IUUC-Ttr-128514	Tursiops truncatus	43.50	1.00e-102	365.00
IUUC-Uma-129556	Ustilago maydis	49.13	0.00e+00	696.00
IUUC-Vda-129715	Verticillium dahliae	47.88	6.00e-166	575.00
IUUC-Vvi-131211	Vitis vinifera	41.91	1.00e-128	452.00
IUUC-Xma-133883	Xiphophorus maculatus	44.95	4.00e-159	553.00
IUUC-Yli-134438	Yarrowia lipolytica	44.53	3.00e-155	540.00
IUUC-Zma-135341	Zea mays	37.21	6.00e-117	413.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence