iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__2181__AT2G40640.1	fgenesh2_kg.4__2181__AT2G40640.1	fgenesh2_kg.4__2181__AT2G40640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.30e-10	40.6	178	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           + + +p+++ lM+d ++lp+G+++ +  + +   +++k c++++qp+ e + +Pnl+lr +++a+++e++s
   Q: 178  AILSDPVTGALMNDATILPCGHSFGAGGLIQ--VQKMKACFTCSQPTLEGSEKPNLSLRIVVHAFRQEEES 246
           5689***********************9977..577777***************************99875 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSVNDSIDPR FLFHVEDESL RFRVGDSGSK IRELETVGDR RFRISGIQQG FCGNRLEKDE 60
TMYSDGDDDE DDVSIRRRTA LIQPGIDSGN NYDSAAAAEE TNRESKNPVG WEMVVREDDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGCTCATG TCCCACTTAC GACGACGTCG TTTTGAAACT CTCTCTGTGT GCTCTTTACT 60
GTCTTACCTT TTTTTTTTTA TCTCAGCTTC CTCTATCGAT CGCCTTGTGA ATTTTCCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_483121

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007585	Arabidopsis thaliana	91.04	0.00e+00	648.00
IUUC-Afu-008866	Aspergillus fumigatus	30.36	1.90e-01	30.40
IUUC-Bol-016386	Brassica oleracea	73.42	3.00e-138	483.00
IUUC-Bra-017754	Brassica rapa	73.20	1.00e-137	481.00
IUUC-Nfi-068522	Neosartorya fischeri	47.62	1.80e-01	30.40
IUUC-Spo-108182	Schizosaccharomyces pombe	31.87	4.00e-04	37.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence