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Tag Content
UUCD2 ID IUUC-Gma-044097
UUCD1 version UUC-GlM-01344
Ensembl Protein ID GLYMA02G34620.1
UniProt Accession I1JGD6; I1JGD6_SOYBN
Genbank Protein ID KRH72081.1; KRH72082.1; KRH72083.1; KRH72084.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000835; CM000835; CM000835; CM000835
Gene Name LOC100800927; GLYMA_02G190600
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GLYMA02G34620 GLYMA02G34620.1 GLYMA02G34620.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.00e-38 129.0 443 476
UBD/Beta-Prp 2.70e-62 212.3 278 502
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
    gH +v +++f ++ +l++G+ D+t+++WDlr+
   Q: 443 GHVKPVLSISFsPNgYHLATGGEDNTCRIWDLRK 476
    899*********77799**************986 PP
   


   UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsf 102
    ++ +++ fs+d+++lat s +g k+w++ + k+ + ++gh++ t+v +sp + l+t+s Drt+k w+ +g+ + t++gh d++ ++f
   Q: 278 DDRPLSGCSFSRDGKWLATCSLTGASKLWSMPKIKKHSIFKGHTERATDVAYSPVHDHLATASADRTAKYWN--QGSLLKTFEGHLDRLARIAF 369
    567888999***************************9999******************************96..8******************* PP
   S: 103 spsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelv 196
    +psg++l ++s d+t r+wd+etg +l +++gh+++v ++++h dg+l +s++lD+ r+Wdl+tg+ + l+g h ++v s+sf++ng +l+
   Q: 370 HPSGKYLGTASFDKTWRLWDIETGDELL-LQEGHSRSVYGLAFHNDGSLAASCGLDSLARVWDLRTGRSILALEG-HVKPVLSISFSPNGYHLA 461
    ****************************.*********************************************9.****************** PP
   S: 197 sgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderl 237
    +g++d+t ++wdl++++ +t +h++ +++v+f p++ ++
   Q: 462 TGGEDNTCRIWDLRKKKSFYTIPAHSNLISQVKFEPHEGYF 502
    ***********************************998765 PP
   

Organism Glycine max
Protein Sequence
(Fasta)
MEVEKENTTS TITAEPSVSA SDGQDPVSSV NASLPDPMQP VIPQVIAPFV VPSLAPIPAI 60
PPPRPLAPLP VRSPVIRPPV PQNGEVGSSD SDSDNDDSNA RINQGGGEYE ISEESRLVRE 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Gma-044097|E3,WD_repeat;UBD,Beta-Prp|Glycine max
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTTTTTGCAT TTTCTTGTTA CGTTTTTCTT TTTTAAAATT TAATTTTATC GATTCGTGTT 60
GGTGTGCATG GTGTGTTGGT GTGCGTGGTG CCGTAGTGGG TGGGGCGCGG TGGTAGTTGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Gma-044097|E3,WD_repeat;UBD,Beta-Prp|Glycine max
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0046540--C:U4/U6 x U5 tri-snRNP complex
GO:0030621--F:U4 snRNA binding
GO:0017070--F:U6 snRNA binding
GO:0000398--P:mRNA splicing, via spliceosome

KEGG gmx:100800927
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-006531 Arabidopsis lyrata 69.84 2.00e-173 602.00
IUUC-Ath-007367 Arabidopsis thaliana 68.55 0.00e+00 667.00
IUUC-Bol-015594 Brassica oleracea 70.34 0.00e+00 640.00
IUUC-Bra-017465 Brassica rapa 69.92 0.00e+00 637.00
IUUC-Dse-031562 Dothistroma septosporum 34.21 4.00e-75 275.00
IUUC-Kpa-049369 Komagataella pastoris 34.04 2.00e-55 209.00
IUUC-Mtr-057656 Medicago truncatula 78.15 0.00e+00 714.00
IUUC-Olu-087580 Ostreococcus lucimarinus 41.86 3.00e-76 279.00
IUUC-Pfo-096812 Poecilia formosa 42.73 1.00e-87 317.00
IUUC-Ptt-103951 Puccinia triticina 32.54 3.00e-72 266.00
IUUC-Sja-107794 Schizosaccharomyces japonicus 36.26 4.00e-67 248.00
Created Date 25-Jun-2017

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