iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d029188	Zm00001d029188_T005	Zm00001d029188_T005
Zm00001d029188	Zm00001d029188_T007	Zm00001d029188_T007
Zm00001d029188	Zm00001d029188_T006	Zm00001d029188_T006
Zm00001d029188	Zm00001d029188_T008	Zm00001d029188_T008
Zm00001d029188	Zm00001d029188_T009	Zm00001d029188_T009
Zm00001d029188	Zm00001d029188_T002	Zm00001d029188_T002
Zm00001d029188	Zm00001d029188_T004	Zm00001d029188_T004
Zm00001d029188	Zm00001d029188_T010	Zm00001d029188_T010

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.40e-35	119.1	423	456
UBD/Beta-Prp	1.90e-61	209.8	275	478

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH  +v +++f ++  l+++Gs D+ +++WDlr+
   Q: 423  GHVKPVLGVSFsPNgYLVATGSEDNFCRIWDLRK 456
           899*********77688899***********986 PP

UBD/Beta-Prp

   S: 27   tgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdr 116
            +s++g +kvw++ + +++++l+gh++  t+v fsp ++ l+t+s Drt+k+w ++ g+ ++++ gh d++  l+f+psg++l ++s d+
   Q: 275  CSSWSGIVKVWSMPQITKVATLKGHTERATDVVFSPADDCLATASADRTAKLWKPD-GSLLMSFDGHLDRLARLAFHPSGKYLGTASFDK 363
           5789*************************************************996.789****************************** PP
   S: 117  tirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvkl 206
           t r+wd++tg++l  +++gh+++v +v++hpdg+l +s++lD   r+Wdl++g+l  tl+g h ++v  +sf++ng  +++gs+d+  ++
   Q: 364  TWRLWDINTGKELL-LQEGHSRSVYGVSFHPDGSLAASCGLDAYARVWDLRSGRLFFTLKG-HVKPVLGVSFSPNGYLVATGSEDNFCRI 451
           **************.*********************************************9.**************************** PP
   S: 207  wdlqtgecvrtlnghtdnvksvrfspn 233
           wdl++ +++++  +h++ ++ v+f p+
   Q: 452  WDLRKRQMLYSIPAHKSIISHVKFEPQ 478
           **********************99865 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MENPRPQAPA LTPPMAPLPV PIHPPIAPIP VPPPRVPAPA PAAAASMAST PTPSTGDGGE 60
AEYEVSDDHR AARERHERAV QELLQRRRAY AMAVPTNDSA VRARLRRLGE PITLFGEREM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTGTTGTCC GCTCGTCAAT CGTCCTCCTT CGGGCTTCGG CACAGCAAGC ACCACCCCCT 60
TCGCCACCGC CACCATCACC GCTACCGCTA CGGCTTCCCA CCTCAAAACC CTAACCCTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0489--Methyltransferase
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	82.83	0.00e+00	723.00
IUUC-Aml-001737	Ailuropoda melanoleuca	41.82	2.00e-108	385.00
IUUC-Atr-002828	Amborella trichopoda	61.22	4.00e-171	593.00
IUUC-Apl-003723	Anas platyrhynchos	41.94	4.00e-108	384.00
IUUC-Aca-004972	Anolis carolinensis	41.20	4.00e-105	374.00
IUUC-Aly-006531	Arabidopsis lyrata	63.71	9.00e-160	556.00
IUUC-Ath-007367	Arabidopsis thaliana	61.95	4.00e-175	607.00
IUUC-Ago-007893	Ashbya gossypii	30.42	3.00e-50	192.00
IUUC-Acl-008236	Aspergillus clavatus	35.95	2.00e-73	269.00
IUUC-Afl-008522	Aspergillus flavus	36.89	2.00e-78	286.00
IUUC-Afu-008904	Aspergillus fumigatus	36.88	5.00e-80	291.00
IUUC-Ani-009198	Aspergillus nidulans	36.09	2.00e-79	289.00
IUUC-Ang-009662	Aspergillus niger	36.95	2.00e-81	295.00
IUUC-Aor-009881	Aspergillus oryzae	36.89	2.00e-78	286.00
IUUC-Ate-010333	Aspergillus terreus	35.21	2.00e-74	272.00
IUUC-Ame-011697	Astyanax mexicanus	39.67	2.00e-105	375.00
IUUC-Bgr-012254	Blumeria graminis	33.93	2.00e-77	282.00
IUUC-Bta-012615	Bos taurus	41.82	8.00e-109	387.00
IUUC-Bci-013720	Botrytis cinerea	35.34	3.00e-80	291.00
IUUC-Bdi-014302	Brachypodium distachyon	84.96	0.00e+00	766.00
IUUC-Bol-015594	Brassica oleracea	63.20	5.00e-167	580.00
IUUC-Bra-017465	Brassica rapa	63.20	2.00e-166	578.00
IUUC-Cel-018632	Caenorhabditis elegans	35.12	7.00e-73	267.00
IUUC-Cja-019747	Callithrix jacchus	41.82	1.00e-108	386.00
IUUC-Cfa-020288	Canis familiaris	41.82	1.00e-108	386.00
IUUC-Cpo-021440	Cavia porcellus	41.82	1.00e-107	382.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	47.87	3.00e-93	334.00
IUUC-Csa-023139	Chlorocebus sabaeus	43.22	2.00e-88	318.00
IUUC-Cho-024481	Choloepus hoffmanni	41.08	3.00e-106	378.00
IUUC-Cin-025106	Ciona intestinalis	37.13	5.00e-94	337.00
IUUC-Csv-026087	Ciona savignyi	38.40	5.00e-93	334.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	33.33	4.00e-77	282.00
IUUC-Cne-026793	Cryptococcus neoformans	36.58	7.00e-85	307.00
IUUC-Dre-028723	Danio rerio	41.45	6.00e-105	374.00
IUUC-Dno-029299	Dasypus novemcinctus	41.61	4.00e-108	384.00
IUUC-Dse-031562	Dothistroma septosporum	34.53	1.00e-74	273.00
IUUC-Dme-031783	Drosophila melanogaster	38.03	1.00e-81	296.00
IUUC-Ete-032669	Echinops telfairi	41.94	2.00e-109	388.00
IUUC-Eca-033566	Equus caballus	41.82	2.00e-108	385.00
IUUC-Eeu-034524	Erinaceus europaeus	44.62	6.00e-67	247.00
IUUC-Fca-036215	Felis catus	41.82	1.00e-108	386.00
IUUC-Fal-037018	Ficedula albicollis	40.00	1.00e-88	320.00
IUUC-Fox-037936	Fusarium oxysporum	32.33	2.00e-70	259.00
IUUC-Fso-038366	Fusarium solani	33.90	1.00e-76	280.00
IUUC-Gmo-038966	Gadus morhua	39.95	2.00e-78	285.00
IUUC-Ggr-039942	Gaeumannomyces graminis	34.46	4.00e-70	258.00
IUUC-Gga-040797	Gallus gallus	42.00	3.00e-108	385.00
IUUC-Gac-042598	Gasterosteus aculeatus	40.04	1.00e-95	343.00
IUUC-Gma-044220	Glycine max	63.56	1.00e-166	578.00
IUUC-Ggo-044682	Gorilla gorilla	41.82	2.00e-108	385.00
IUUC-Hsa-045804	Homo sapiens	41.82	1.00e-108	386.00
IUUC-Hvu-047567	Hordeum vulgare	81.78	0.00e+00	691.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	42.03	6.00e-109	387.00
IUUC-Kpa-049369	Komagataella pastoris	32.20	8.00e-53	200.00
IUUC-Lch-050074	Latimeria chalumnae	40.40	8.00e-99	353.00
IUUC-Lpe-051333	Leersia perrieri	80.65	0.00e+00	687.00
IUUC-Loc-052164	Lepisosteus oculatus	41.23	2.00e-107	382.00
IUUC-Lma-053088	Leptosphaeria maculans	35.52	4.00e-72	265.00
IUUC-Laf-053460	Loxodonta africana	41.82	1.00e-108	386.00
IUUC-Mcc-055859	Macaca mulatta	41.82	1.00e-108	386.00
IUUC-Meu-056134	Macropus eugenii	41.61	2.00e-108	385.00
IUUC-Mor-057251	Magnaporthe oryzae	35.15	7.00e-77	280.00
IUUC-Mpo-057375	Magnaporthe poae	40.64	3.00e-51	194.00
IUUC-Mtr-057656	Medicago truncatula	63.56	1.00e-149	522.00
IUUC-Mla-059145	Melampsora laricipopulina	38.85	2.00e-81	295.00
IUUC-Mga-059855	Meleagris gallopavo	41.94	3.00e-108	385.00
IUUC-Mvi-060372	Microbotryum violaceum	37.91	2.00e-72	266.00
IUUC-Mmr-060826	Microcebus murinus	41.82	2.00e-108	385.00
IUUC-Mdo-062748	Monodelphis domestica	41.82	2.00e-108	385.00
IUUC-Mmu-063351	Mus musculus	41.82	3.00e-108	385.00
IUUC-Mac-064846	Musa acuminata	69.55	7.00e-170	589.00
IUUC-Mpu-066006	Mustela putorius furo	41.82	1.00e-108	386.00
IUUC-Mlu-067722	Myotis lucifugus	42.03	5.00e-109	387.00
IUUC-Nfi-068399	Neosartorya fischeri	36.71	7.00e-82	297.00
IUUC-Ncr-068711	Neurospora crassa	36.27	2.00e-82	299.00
IUUC-Nle-069982	Nomascus leucogenys	41.82	1.00e-108	386.00
IUUC-Opr-070596	Ochotona princeps	41.34	3.00e-108	385.00
IUUC-Ont-072374	Oreochromis niloticus	41.98	3.00e-101	361.00
IUUC-Oan-073166	Ornithorhynchus anatinus	42.60	3.00e-92	331.00
IUUC-Ocu-074371	Oryctolagus cuniculus	41.61	4.00e-108	384.00
IUUC-Oba-075083	Oryza barthii	80.76	0.00e+00	770.00
IUUC-Obr-076405	Oryza brachyantha	83.48	0.00e+00	705.00
IUUC-Ogl-077683	Oryza glaberrima	85.63	0.00e+00	756.00
IUUC-Ogu-078486	Oryza glumaepatula	84.96	0.00e+00	749.00
IUUC-Oin-079679	Oryza indica	84.90	0.00e+00	768.00
IUUC-Olo-080243	Oryza longistaminata	84.49	0.00e+00	665.00
IUUC-Ome-081230	Oryza meridionalis	84.76	0.00e+00	771.00
IUUC-Oni-082961	Oryza nivara	84.69	0.00e+00	768.00
IUUC-Opu-083189	Oryza punctata	80.40	0.00e+00	780.00
IUUC-Oru-084353	Oryza rufipogon	84.35	0.00e+00	738.00
IUUC-Osa-085458	Oryza sativa	84.76	0.00e+00	771.00
IUUC-Ola-086940	Oryzias latipes	41.99	2.00e-106	379.00
IUUC-Olu-087580	Ostreococcus lucimarinus	39.96	7.00e-75	273.00
IUUC-Oga-088703	Otolemur garnettii	40.25	4.00e-103	368.00
IUUC-Oar-089829	Ovis aries	42.03	5.00e-109	387.00
IUUC-Ptr-090838	Pan troglodytes	41.82	1.00e-108	386.00
IUUC-Pan-092261	Papio anubis	41.74	4.00e-107	381.00
IUUC-Psi-093020	Pelodiscus sinensis	40.99	9.00e-108	383.00
IUUC-Pno-094858	Phaeosphaeria nodorum	36.07	1.00e-72	266.00
IUUC-Ppa-095531	Physcomitrella patens	58.70	1.00e-156	545.00
IUUC-Pfo-096812	Poecilia formosa	38.38	1.00e-81	296.00
IUUC-Pab-097805	Pongo abelii	43.42	1.00e-88	320.00
IUUC-Pop-100051	Populus trichocarpa	62.68	3.00e-162	564.00
IUUC-Pca-100152	Procavia capensis	41.82	3.00e-108	385.00
IUUC-Ppe-101244	Prunus persica	61.32	6.00e-154	536.00
IUUC-Pva-102529	Pteropus vampyrus	39.96	5.00e-100	357.00
IUUC-Pgr-103550	Puccinia graminis	35.51	9.00e-84	303.00
IUUC-Ptt-103951	Puccinia triticina	36.78	1.00e-56	213.00
IUUC-Pte-104151	Pyrenophora teres	33.60	3.00e-66	245.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	33.81	3.00e-66	245.00
IUUC-Rno-105747	Rattus norvegicus	42.03	2.00e-108	385.00
IUUC-Sce-106418	Saccharomyces cerevisiae	31.96	2.00e-59	222.00
IUUC-Sha-107334	Sarcophilus harrisii	41.61	2.00e-108	385.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	32.91	1.00e-58	219.00
IUUC-Spo-108189	Schizosaccharomyces pombe	39.87	3.00e-86	311.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	34.74	5.00e-80	291.00
IUUC-Smo-109578	Selaginella moellendorffii	54.22	1.00e-151	529.00
IUUC-Sit-110102	Setaria italica	88.33	0.00e+00	776.00
IUUC-Sly-111668	Solanum lycopersicum	64.56	1.00e-163	568.00
IUUC-Stu-111928	Solanum tuberosum	64.35	2.00e-163	568.00
IUUC-Sar-113266	Sorex araneus	36.23	1.00e-88	319.00
IUUC-Sbi-114134	Sorghum bicolor	91.15	0.00e+00	797.00
IUUC-Sre-115114	Sporisorium reilianum	38.27	4.00e-83	301.00
IUUC-Ssc-115443	Sus scrofa	41.82	2.00e-108	385.00
IUUC-Tgu-117157	Taeniopygia guttata	41.53	3.00e-108	385.00
IUUC-Tru-118587	Takifugu rubripes	41.54	6.00e-103	367.00
IUUC-Tsy-119157	Tarsius syrichta	43.95	2.00e-95	342.00
IUUC-Tni-120427	Tetraodon nigroviridis	41.43	3.00e-103	368.00
IUUC-Tca-121368	Theobroma cacao	63.78	2.00e-175	608.00
IUUC-Tre-122074	Trichoderma reesei	34.37	5.00e-75	274.00
IUUC-Tvi-122349	Trichoderma virens	33.59	2.00e-74	272.00
IUUC-Tae-125651	Triticum aestivum	83.26	0.00e+00	748.00
IUUC-Tur-126532	Triticum urartu	82.34	0.00e+00	647.00
IUUC-Tme-126951	Tuber melanosporum	36.25	1.00e-76	280.00
IUUC-Tbe-128136	Tupaia belangeri	48.88	4.00e-80	291.00
IUUC-Ttr-129169	Tursiops truncatus	35.74	1.00e-50	193.00
IUUC-Uma-129399	Ustilago maydis	36.63	1.00e-79	290.00
IUUC-Vda-129842	Verticillium dahliae	36.84	2.00e-81	295.00
IUUC-Vpa-130440	Vicugna pacos	41.82	7.00e-109	387.00
IUUC-Vvi-131075	Vitis vinifera	63.10	3.00e-162	565.00
IUUC-Xma-133002	Xiphophorus maculatus	43.38	3.00e-88	318.00
IUUC-Yli-134569	Yarrowia lipolytica	33.74	1.00e-68	253.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence