iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099744

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000343

Gene Name

POPTRDRAFT_868235; POPTR_0007s00230g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s00230	POPTR_0007s00230.1	POPTR_0007s00230.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	44.52	4.00e-82	302.00	IUUC-Ath-007179

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEETKTSIIK LQKAVEDDQK QLQQLIPGLP DEISMECLVR VPYQFHSNMK SVCHTWQHLI 60
SHPSFYQQRL KSGTSEHLVC LVQPLPPIND STTTTTTEYD DNPLDSNNNK TTKNEDKQEQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGAAA CAAAGACTAG TATTATCAAA CTACAAAAAG CAGTGGAAGA CGATCAAAAG 60
CAGCTGCAGC AGCTGATTCC AGGCCTGCCA GATGAGATTT CTATGGAGTG CCTGGTGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR015915--Kelch-typ_b-propeller
IPR006652--Kelch_1

Pfam

PF01344--Kelch_1

SMART

SM00256--FBOX
SM00612--Kelch

KEGG

pop:POPTR_0007s00230g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006346	Arabidopsis lyrata	42.34	2.00e-90	325.00
IUUC-Ath-007179	Arabidopsis thaliana	50.96	1.00e-79	289.00
IUUC-Bdi-014291	Brachypodium distachyon	37.13	5.00e-45	174.00
IUUC-Bol-015268	Brassica oleracea	43.45	5.00e-70	257.00
IUUC-Bra-017941	Brassica rapa	49.03	3.00e-85	308.00
IUUC-Hvu-047595	Hordeum vulgare	38.87	4.00e-47	181.00
IUUC-Mac-064513	Musa acuminata	40.50	2.00e-31	129.00
IUUC-Oba-075542	Oryza barthii	34.89	5.00e-32	130.00
IUUC-Ogl-077394	Oryza glaberrima	30.60	3.00e-50	192.00
IUUC-Ogu-078293	Oryza glumaepatula	30.50	1.00e-51	196.00
IUUC-Oin-079587	Oryza indica	30.60	3.00e-50	192.00
IUUC-Ome-081207	Oryza meridionalis	31.11	7.00e-50	190.00
IUUC-Oni-082785	Oryza nivara	30.60	3.00e-50	192.00
IUUC-Opu-083469	Oryza punctata	39.26	1.00e-53	203.00
IUUC-Oru-084871	Oryza rufipogon	30.82	2.00e-51	196.00
IUUC-Osa-085305	Oryza sativa	30.82	2.00e-51	196.00
IUUC-Ppa-095543	Physcomitrella patens	36.01	1.00e-50	193.00
IUUC-Pyt-104553	Pyrenophora triticirepentis	26.17	5.00e-05	42.00
IUUC-Smo-109140	Selaginella moellendorffii	38.36	3.00e-53	201.00
IUUC-Sit-109955	Setaria italica	33.03	2.00e-45	176.00
IUUC-Sbi-114689	Sorghum bicolor	32.88	6.00e-56	210.00
IUUC-Tae-125085	Triticum aestivum	39.44	4.00e-50	191.00
IUUC-Vvi-131439	Vitis vinifera	50.44	2.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence