iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-106611

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01085003

Gene Name

SEC13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000016558.1	ENSSHAT00000019652.1	ENSSHAP00000019495.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-29	99.7	54	86

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWD 29
           gH+++v+ +a+  +   ++l+s+s+D ++ +W 
   Q: 54   GHEGPVWQVAWahPMygNILASCSYDRKVIIWK 86
           8***********9666699*************8 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

VSVINTVDTS HEDMIHDAQM DYYGTRLATC SSDRSVKIFD VRNGGQILIA DLRGHEGPVW 60
QVAWAHPMYG NILASCSYDR KVIIWKEENG TWEKTYEYTG HDSSVNSVCW APHDYGLLLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGTCAGTCA TTAACACGGT GGATACCTCC CATGAGGACA TGATTGTGAG TGTTATATTT 60
AACAGTTACT GAAACAAATC AAAAACTGAC TTTCTTGTGG GATAGCACTT TTTTTTTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0070062--C:extracellular exosome
GO:0061700--C:GATOR2 complex
GO:0000776--C:kinetochore
GO:0031080--C:nuclear pore outer ring
GO:0005654--C:nucleoplasm
GO:0032008--P:positive regulation of TOR signaling

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000671	Aegilops tauschii	54.82	2.00e-92	331.00
IUUC-Aml-001832	Ailuropoda melanoleuca	95.02	0.00e+00	633.00
IUUC-Atr-002914	Amborella trichopoda	56.19	5.00e-93	333.00
IUUC-Apl-003992	Anas platyrhynchos	94.10	1.00e-172	598.00
IUUC-Aca-005283	Anolis carolinensis	93.44	0.00e+00	626.00
IUUC-Aly-005654	Arabidopsis lyrata	55.33	1.00e-90	325.00
IUUC-Ath-006816	Arabidopsis thaliana	56.00	5.00e-91	327.00
IUUC-Ago-007827	Ashbya gossypii	50.99	5.00e-84	303.00
IUUC-Acl-008205	Aspergillus clavatus	50.83	9.00e-81	293.00
IUUC-Afl-008748	Aspergillus flavus	50.49	2.00e-83	301.00
IUUC-Afu-008791	Aspergillus fumigatus	50.83	1.00e-80	293.00
IUUC-Ani-009152	Aspergillus nidulans	50.16	9.00e-84	303.00
IUUC-Ang-009765	Aspergillus niger	50.49	1.00e-83	302.00
IUUC-Aor-009927	Aspergillus oryzae	50.33	2.00e-80	291.00
IUUC-Ate-010248	Aspergillus terreus	50.16	3.00e-83	301.00
IUUC-Ame-011478	Astyanax mexicanus	87.81	3.00e-170	590.00
IUUC-Bgr-012276	Blumeria graminis	49.66	2.00e-80	291.00
IUUC-Bta-012700	Bos taurus	94.39	0.00e+00	630.00
IUUC-Bci-013722	Botrytis cinerea	49.83	1.00e-82	299.00
IUUC-Bdi-014818	Brachypodium distachyon	54.82	3.00e-92	331.00
IUUC-Bol-015779	Brassica oleracea	56.80	1.00e-90	325.00
IUUC-Bra-016973	Brassica rapa	55.97	2.00e-90	326.00
IUUC-Cel-018479	Caenorhabditis elegans	41.21	5.00e-69	254.00
IUUC-Cja-019956	Callithrix jacchus	94.77	5.00e-165	573.00
IUUC-Cfa-020752	Canis familiaris	95.64	0.00e+00	637.00
IUUC-Cpo-021871	Cavia porcellus	93.46	4.00e-180	623.00
IUUC-Cre-022797	Chlamydomonas reinhardtii	54.13	5.00e-96	343.00
IUUC-Csa-023393	Chlorocebus sabaeus	94.70	0.00e+00	634.00
IUUC-Cho-024786	Choloepus hoffmanni	74.77	3.00e-131	461.00
IUUC-Cin-025332	Ciona intestinalis	70.03	3.00e-132	464.00
IUUC-Csv-025926	Ciona savignyi	68.40	8.00e-129	452.00
IUUC-Cgl-026413	Colletotrichum gloeosporioides	51.88	8.00e-80	289.00
IUUC-Cne-027054	Cryptococcus neoformans	49.38	7.00e-78	283.00
IUUC-Cme-027165	Cyanidioschyzon merolae	34.51	2.00e-50	193.00
IUUC-Dre-027782	Danio rerio	89.06	1.00e-172	598.00
IUUC-Dno-029628	Dasypus novemcinctus	95.02	0.00e+00	633.00
IUUC-Dor-030650	Dipodomys ordii	77.26	1.00e-140	492.00
IUUC-Dse-031206	Dothistroma septosporum	47.19	3.00e-78	285.00
IUUC-Dme-031854	Drosophila melanogaster	59.27	3.00e-102	364.00
IUUC-Ete-032618	Echinops telfairi	66.98	3.00e-117	414.00
IUUC-Eca-033268	Equus caballus	96.26	0.00e+00	638.00
IUUC-Fca-035918	Felis catus	95.33	0.00e+00	634.00
IUUC-Fal-037551	Ficedula albicollis	92.83	1.00e-161	561.00
IUUC-Fox-037763	Fusarium oxysporum	49.50	2.00e-82	298.00
IUUC-Fso-038341	Fusarium solani	48.85	5.00e-81	293.00
IUUC-Gmo-038638	Gadus morhua	88.44	1.00e-172	598.00
IUUC-Ggr-039865	Gaeumannomyces graminis	48.66	1.00e-78	286.00
IUUC-Gga-040193	Gallus gallus	93.75	4.00e-180	623.00
IUUC-Gma-044311	Glycine max	54.85	3.00e-91	328.00
IUUC-Ggo-045252	Gorilla gorilla	94.39	0.00e+00	632.00
IUUC-Hsa-046565	Homo sapiens	94.08	0.00e+00	630.00
IUUC-Hvu-047835	Hordeum vulgare	55.81	6.00e-94	337.00
IUUC-Itr-048587	Ictidomys tridecemlineatus	94.70	0.00e+00	630.00
IUUC-Kpa-049148	Komagataella pastoris	52.32	6.00e-86	310.00
IUUC-Lch-050421	Latimeria chalumnae	90.31	1.00e-175	608.00
IUUC-Lpe-051187	Leersia perrieri	53.82	2.00e-93	337.00
IUUC-Loc-052167	Lepisosteus oculatus	89.10	5.00e-173	599.00
IUUC-Lma-053250	Leptosphaeria maculans	52.35	1.00e-81	295.00
IUUC-Laf-054304	Loxodonta africana	95.02	0.00e+00	631.00
IUUC-Mcc-055519	Macaca mulatta	94.70	0.00e+00	633.00
IUUC-Meu-056439	Macropus eugenii	100.00	0.00e+00	655.00
IUUC-Mor-057241	Magnaporthe oryzae	49.32	8.00e-79	286.00
IUUC-Mpo-057373	Magnaporthe poae	43.73	3.00e-64	237.00
IUUC-Mtr-058412	Medicago truncatula	54.85	2.00e-89	321.00
IUUC-Mla-058966	Melampsora laricipopulina	49.09	5.00e-86	310.00
IUUC-Mga-060066	Meleagris gallopavo	94.10	1.00e-172	598.00
IUUC-Mvi-060290	Microbotryum violaceum	46.79	3.00e-80	294.00
IUUC-Mmr-060717	Microcebus murinus	95.33	0.00e+00	633.00
IUUC-Mdo-062496	Monodelphis domestica	98.75	0.00e+00	653.00
IUUC-Mmu-063490	Mus musculus	95.02	0.00e+00	633.00
IUUC-Mac-065307	Musa acuminata	55.63	8.00e-89	320.00
IUUC-Mpu-066601	Mustela putorius furo	95.64	0.00e+00	637.00
IUUC-Mlu-067501	Myotis lucifugus	95.33	0.00e+00	635.00
IUUC-Nfi-068360	Neosartorya fischeri	49.62	2.00e-66	245.00
IUUC-Ncr-068928	Neurospora crassa	49.50	3.00e-83	301.00
IUUC-Nle-069028	Nomascus leucogenys	94.08	0.00e+00	631.00
IUUC-Opr-070446	Ochotona princeps	94.12	2.00e-173	600.00
IUUC-Ont-071587	Oreochromis niloticus	87.19	8.00e-173	598.00
IUUC-Oan-073211	Ornithorhynchus anatinus	94.69	0.00e+00	635.00
IUUC-Ocu-074306	Oryctolagus cuniculus	93.46	2.00e-179	620.00
IUUC-Oba-075069	Oryza barthii	54.13	4.00e-92	330.00
IUUC-Obr-076667	Oryza brachyantha	54.82	1.00e-92	332.00
IUUC-Ogl-077208	Oryza glaberrima	54.13	4.00e-92	330.00
IUUC-Ogu-078513	Oryza glumaepatula	54.13	4.00e-92	330.00
IUUC-Oin-079094	Oryza indica	54.13	4.00e-92	330.00
IUUC-Olo-080473	Oryza longistaminata	54.13	4.00e-92	330.00
IUUC-Ome-081643	Oryza meridionalis	54.13	4.00e-92	330.00
IUUC-Oni-082589	Oryza nivara	54.13	4.00e-92	330.00
IUUC-Opu-083677	Oryza punctata	54.13	5.00e-92	330.00
IUUC-Oru-084537	Oryza rufipogon	54.13	4.00e-92	330.00
IUUC-Osa-085449	Oryza sativa	54.13	4.00e-92	330.00
IUUC-Ola-087226	Oryzias latipes	87.19	6.00e-171	592.00
IUUC-Olu-087893	Ostreococcus lucimarinus	53.08	2.00e-80	291.00
IUUC-Oga-088837	Otolemur garnettii	95.33	0.00e+00	635.00
IUUC-Oar-089594	Ovis aries	95.02	0.00e+00	632.00
IUUC-Ptr-091132	Pan troglodytes	94.08	0.00e+00	629.00
IUUC-Psi-093568	Pelodiscus sinensis	94.14	2.00e-174	603.00
IUUC-Pma-094172	Petromyzon marinus	71.34	2.00e-62	230.00
IUUC-Pno-094955	Phaeosphaeria nodorum	50.66	5.00e-80	290.00
IUUC-Ppa-095578	Physcomitrella patens	56.77	2.00e-93	335.00
IUUC-Pfo-096063	Poecilia formosa	88.12	5.00e-172	596.00
IUUC-Pab-098674	Pongo abelii	93.77	0.00e+00	627.00
IUUC-Pop-099402	Populus trichocarpa	55.00	4.00e-91	327.00
IUUC-Pca-100824	Procavia capensis	76.64	1.00e-140	492.00
IUUC-Ppe-101707	Prunus persica	54.85	7.00e-89	320.00
IUUC-Pva-103161	Pteropus vampyrus	90.97	9.00e-175	605.00
IUUC-Pgr-103573	Puccinia graminis	53.25	1.00e-89	322.00
IUUC-Ptt-103700	Puccinia triticina	51.59	4.00e-82	297.00
IUUC-Pte-104267	Pyrenophora teres	50.68	2.00e-78	285.00
IUUC-Pyt-104535	Pyrenophora triticirepentis	49.32	8.00e-71	259.00
IUUC-Rno-104833	Rattus norvegicus	95.33	0.00e+00	634.00
IUUC-Sce-106437	Saccharomyces cerevisiae	51.83	1.00e-77	282.00
IUUC-Sja-107654	Schizosaccharomyces japonicus	49.50	2.00e-82	298.00
IUUC-Spo-108362	Schizosaccharomyces pombe	51.16	4.00e-86	310.00
IUUC-Smo-109674	Selaginella moellendorffii	54.93	4.00e-93	334.00
IUUC-Sit-110132	Setaria italica	53.80	3.00e-92	331.00
IUUC-Sly-111254	Solanum lycopersicum	53.67	2.00e-87	315.00
IUUC-Stu-112591	Solanum tuberosum	53.14	2.00e-87	315.00
IUUC-Sbi-114229	Sorghum bicolor	53.67	8.00e-92	329.00
IUUC-Sre-114898	Sporisorium reilianum	48.14	1.00e-89	323.00
IUUC-Ssc-115995	Sus scrofa	95.33	5.00e-84	302.00
IUUC-Tgu-116793	Taeniopygia guttata	93.12	2.00e-169	587.00
IUUC-Tru-117797	Takifugu rubripes	87.19	2.00e-171	594.00
IUUC-Tsy-118967	Tarsius syrichta	92.06	2.00e-27	116.00
IUUC-Tni-120366	Tetraodon nigroviridis	87.19	5.00e-172	596.00
IUUC-Tca-121068	Theobroma cacao	54.95	7.00e-89	320.00
IUUC-Tre-121899	Trichoderma reesei	49.83	2.00e-82	298.00
IUUC-Tvi-122380	Trichoderma virens	50.00	2.00e-82	298.00
IUUC-Tae-123998	Triticum aestivum	56.48	4.00e-95	340.00
IUUC-Tur-126202	Triticum urartu	55.81	8.00e-94	336.00
IUUC-Tme-127181	Tuber melanosporum	52.92	3.00e-88	318.00
IUUC-Ttr-128448	Tursiops truncatus	82.87	9.00e-155	539.00
IUUC-Uma-129661	Ustilago maydis	48.70	1.00e-90	326.00
IUUC-Vda-129666	Verticillium dahliae	52.22	4.00e-80	290.00
IUUC-Vpa-130318	Vicugna pacos	95.33	0.00e+00	635.00
IUUC-Vvi-130868	Vitis vinifera	54.00	2.00e-89	322.00
IUUC-Xtr-131859	Xenopus tropicalis	90.62	1.00e-174	604.00
IUUC-Xma-133898	Xiphophorus maculatus	88.12	2.00e-172	597.00
IUUC-Yli-134559	Yarrowia lipolytica	51.36	2.00e-82	298.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence