iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042879

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000838

Gene Name

LOC100812016; GLYMA_05G037000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA05G02130	GLYMA05G02130.2	GLYMA05G02130.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-07	33.5	235	276

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+f   ++++ lpC H fh +C+  w       + + +CP Cr
   Q: 235  CPICLEEFyvGNEVRGLPCAHNFHVECIDEW------LRLNVKCPRCR 276
           ********99666******************......**********8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MAIRGVDFKW YDGFFLSMLA TSVVIVAINW KRYHSCTYPL HIWIVVDYTT VFVFRLLMFV 60
DNGLAAGMGL DFGWQQRYAR FCGRVVVFSI LVLLLYPFLW AWTVIGTLWF SSAKNCLPEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGAAGAAGTG CAGTGTGCAA CACGCGCACA CTCAAACAAA CAAATCAGCA CAAGTCAATG 60
TGCCGTTGGC GGTGCGGTGA TCACATTTTT TACTGTGTCT TCTTCTCTTC ACTCACCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

gmx:100812016

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000667	Aegilops tauschii	85.47	8.00e-153	534.00
IUUC-Atr-002648	Amborella trichopoda	76.16	2.00e-160	558.00
IUUC-Aly-006490	Arabidopsis lyrata	75.48	1.00e-159	555.00
IUUC-Ath-007655	Arabidopsis thaliana	74.93	2.00e-159	554.00
IUUC-Bdi-014759	Brachypodium distachyon	77.68	3.00e-143	501.00
IUUC-Bol-015136	Brassica oleracea	74.25	7.00e-156	543.00
IUUC-Bra-018024	Brassica rapa	72.78	9.00e-148	516.00
IUUC-Fox-037731	Fusarium oxysporum	36.28	5.00e-11	61.20
IUUC-Hvu-047589	Hordeum vulgare	82.99	6.00e-68	249.00
IUUC-Lpe-051403	Leersia perrieri	69.70	2.00e-108	384.00
IUUC-Mtr-058746	Medicago truncatula	88.89	0.00e+00	707.00
IUUC-Mac-064833	Musa acuminata	83.62	5.00e-167	580.00
IUUC-Oba-075099	Oryza barthii	83.64	8.00e-157	546.00
IUUC-Obr-076541	Oryza brachyantha	72.89	3.00e-159	554.00
IUUC-Ogl-077544	Oryza glaberrima	83.64	1.00e-156	545.00
IUUC-Ogu-078123	Oryza glumaepatula	78.09	4.00e-143	500.00
IUUC-Oin-079313	Oryza indica	83.12	1.00e-150	525.00
IUUC-Olo-080383	Oryza longistaminata	60.24	2.00e-98	352.00
IUUC-Ome-081106	Oryza meridionalis	71.10	2.00e-118	418.00
IUUC-Oni-082730	Oryza nivara	83.43	2.00e-160	558.00
IUUC-Opu-083224	Oryza punctata	78.85	6.00e-158	550.00
IUUC-Oru-085150	Oryza rufipogon	83.94	3.00e-130	458.00
IUUC-Osa-086306	Oryza sativa	83.33	8.00e-157	546.00
IUUC-Pop-099421	Populus trichocarpa	82.68	8.00e-165	572.00
IUUC-Ppe-101399	Prunus persica	81.12	2.00e-155	541.00
IUUC-Smo-109501	Selaginella moellendorffii	68.47	2.00e-120	424.00
IUUC-Sit-109685	Setaria italica	80.35	6.00e-156	543.00
IUUC-Sly-111730	Solanum lycopersicum	83.52	3.00e-176	610.00
IUUC-Stu-112358	Solanum tuberosum	80.39	1.00e-176	612.00
IUUC-Sbi-114646	Sorghum bicolor	80.35	6.00e-155	540.00
IUUC-Tca-121643	Theobroma cacao	85.71	0.00e+00	641.00
IUUC-Tae-124899	Triticum aestivum	80.47	5.00e-155	540.00
IUUC-Tur-126639	Triticum urartu	85.43	1.00e-124	440.00
IUUC-Vvi-131627	Vitis vinifera	78.22	4.00e-170	590.00
IUUC-Zma-135793	Zea mays	80.47	1.00e-149	522.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence