iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130872

UUCD1 version

UUC-ViV-00370

Ensembl Protein ID

VIT_18s0001g10390.t01

UniProt Accession

E0CPU3; E0CPU3_VITVI

Genbank Protein ID

CBI19506.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595227

Gene Name

RID3; VIT_18s0001g10390

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_18s0001g10390	VIT_18s0001g10390.t01	VIT_18s0001g10390.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-26	91.3	271	303

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtl.lvsGsdDgtikvWDlrt 32
           H+  vtclaf +d++ lvsGs Dg ++vWD++t
   Q: 271  HSKAVTCLAFaTDGIlLVSGSEDGMVRVWDTKT 303
           999********996637*************876 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MDGTEVVVAS SPVDAGISCW DLQSGAEHLR HRSCASPPHG LVCVADRFFA SSQLRDSSSS 60
SSSGSIFYWS WSKPQVEVKS FPAEPIKPLA ANREGTYIAG GGLSGDIYFW EVASGRLLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGAAATCAG AACCTCAATG GACGGAACGG AGGTGGTCGT GGCTTCGTCC CCTGTAGATG 60
CCGGCATCAG TTGCTGGGAC CTGCAGTCAG GGGCGGAGCA TCTCCGTCAT CGGTCCTGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR023302--Pept_S9A_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

vvi:100264347

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001040	Aegilops tauschii	42.60	8.00e-81	293.00
IUUC-Aml-001819	Ailuropoda melanoleuca	32.73	4.00e-30	125.00
IUUC-Atr-002688	Amborella trichopoda	55.95	1.00e-125	442.00
IUUC-Apl-004023	Anas platyrhynchos	28.46	1.00e-17	83.20
IUUC-Aca-004879	Anolis carolinensis	33.33	6.00e-10	55.80
IUUC-Aly-006061	Arabidopsis lyrata	58.53	3.00e-145	507.00
IUUC-Ath-007111	Arabidopsis thaliana	56.55	1.00e-143	502.00
IUUC-Acl-008357	Aspergillus clavatus	28.52	1.00e-25	110.00
IUUC-Afl-008564	Aspergillus flavus	25.78	1.00e-22	100.00
IUUC-Afu-009113	Aspergillus fumigatus	27.56	2.00e-25	109.00
IUUC-Ani-009132	Aspergillus nidulans	29.69	6.00e-27	114.00
IUUC-Ang-009586	Aspergillus niger	26.80	6.00e-25	107.00
IUUC-Aor-009882	Aspergillus oryzae	25.78	7.00e-23	101.00
IUUC-Ate-010249	Aspergillus terreus	26.30	3.00e-22	99.00
IUUC-Ame-010912	Astyanax mexicanus	28.99	1.00e-39	156.00
IUUC-Bta-013402	Bos taurus	34.04	2.00e-36	145.00
IUUC-Bci-013791	Botrytis cinerea	28.33	1.00e-21	97.10
IUUC-Bdi-015054	Brachypodium distachyon	46.90	3.00e-105	374.00
IUUC-Bol-016342	Brassica oleracea	58.19	9.00e-126	442.00
IUUC-Bra-016967	Brassica rapa	58.19	1.00e-125	442.00
IUUC-Cja-019758	Callithrix jacchus	31.59	5.00e-36	144.00
IUUC-Cfa-020495	Canis familiaris	35.55	7.00e-32	130.00
IUUC-Cpo-021438	Cavia porcellus	36.82	2.00e-37	149.00
IUUC-Csa-023416	Chlorocebus sabaeus	31.59	1.00e-35	143.00
IUUC-Csv-025918	Ciona savignyi	30.89	4.00e-25	108.00
IUUC-Cgl-026618	Colletotrichum gloeosporioides	28.27	5.00e-21	94.70
IUUC-Cne-026843	Cryptococcus neoformans	28.52	9.00e-23	100.00
IUUC-Dre-027560	Danio rerio	28.61	8.00e-39	153.00
IUUC-Dno-029315	Dasypus novemcinctus	33.52	4.00e-45	174.00
IUUC-Dor-030935	Dipodomys ordii	31.87	1.00e-40	159.00
IUUC-Dse-031492	Dothistroma septosporum	28.24	6.00e-24	104.00
IUUC-Dme-032059	Drosophila melanogaster	31.73	3.00e-36	145.00
IUUC-Fca-036068	Felis catus	33.13	7.00e-31	127.00
IUUC-Fal-037467	Ficedula albicollis	36.80	7.00e-42	163.00
IUUC-Fox-037903	Fusarium oxysporum	30.54	9.00e-24	103.00
IUUC-Gmo-039323	Gadus morhua	29.48	5.00e-28	117.00
IUUC-Ggr-040050	Gaeumannomyces graminis	28.35	2.00e-11	62.80
IUUC-Gga-040563	Gallus gallus	36.80	3.00e-35	142.00
IUUC-Gac-042641	Gasterosteus aculeatus	28.22	1.00e-37	149.00
IUUC-Gma-043856	Glycine max	68.62	5.00e-174	603.00
IUUC-Ggo-045137	Gorilla gorilla	31.87	3.00e-31	128.00
IUUC-Hsa-046335	Homo sapiens	31.59	2.00e-30	125.00
IUUC-Hvu-047685	Hordeum vulgare	45.10	2.00e-91	328.00
IUUC-Itr-048032	Ictidomys tridecemlineatus	31.15	3.00e-40	158.00
IUUC-Kpa-049129	Komagataella pastoris	28.31	1.00e-29	123.00
IUUC-Lch-049532	Latimeria chalumnae	33.06	1.00e-44	173.00
IUUC-Lpe-051321	Leersia perrieri	57.04	1.00e-84	305.00
IUUC-Loc-052471	Lepisosteus oculatus	29.53	1.00e-30	126.00
IUUC-Lma-053091	Leptosphaeria maculans	25.38	4.00e-23	102.00
IUUC-Laf-054331	Loxodonta africana	33.33	2.00e-34	139.00
IUUC-Mcc-055803	Macaca mulatta	31.59	1.00e-35	143.00
IUUC-Meu-056090	Macropus eugenii	33.85	2.00e-38	152.00
IUUC-Mor-057160	Magnaporthe oryzae	27.48	1.00e-20	93.60
IUUC-Mtr-058800	Medicago truncatula	64.63	2.00e-165	574.00
IUUC-Mla-058943	Melampsora laricipopulina	31.36	1.00e-21	97.10
IUUC-Mga-059282	Meleagris gallopavo	34.92	2.00e-37	149.00
IUUC-Mvi-060315	Microbotryum violaceum	38.98	5.00e-28	118.00
IUUC-Mmr-061127	Microcebus murinus	33.74	3.00e-36	145.00
IUUC-Mdo-062350	Monodelphis domestica	33.85	3.00e-38	151.00
IUUC-Mmu-063706	Mus musculus	31.51	7.00e-41	160.00
IUUC-Mac-065066	Musa acuminata	72.77	2.00e-80	290.00
IUUC-Mpu-066711	Mustela putorius furo	33.13	3.00e-40	158.00
IUUC-Mlu-068121	Myotis lucifugus	33.90	3.00e-35	141.00
IUUC-Nfi-068454	Neosartorya fischeri	27.16	5.00e-25	108.00
IUUC-Ncr-068914	Neurospora crassa	25.89	2.00e-19	89.40
IUUC-Nle-069518	Nomascus leucogenys	33.67	2.00e-32	132.00
IUUC-Ont-071435	Oreochromis niloticus	28.79	2.00e-37	149.00
IUUC-Oba-075873	Oryza barthii	55.80	3.00e-101	360.00
IUUC-Obr-076664	Oryza brachyantha	55.69	2.00e-51	195.00
IUUC-Ogl-077840	Oryza glaberrima	45.89	1.00e-102	365.00
IUUC-Ogu-077988	Oryza glumaepatula	55.80	3.00e-101	360.00
IUUC-Oin-079237	Oryza indica	56.60	4.00e-67	247.00
IUUC-Olo-080415	Oryza longistaminata	43.69	1.00e-90	327.00
IUUC-Ome-081952	Oryza meridionalis	56.43	3.00e-101	360.00
IUUC-Oni-082300	Oryza nivara	55.80	3.00e-101	360.00
IUUC-Opu-083436	Oryza punctata	57.49	3.00e-65	241.00
IUUC-Oru-085164	Oryza rufipogon	56.11	9.00e-102	362.00
IUUC-Osa-086129	Oryza sativa	45.43	6.00e-101	360.00
IUUC-Ola-086571	Oryzias latipes	33.14	8.00e-37	147.00
IUUC-Olu-087630	Ostreococcus lucimarinus	36.29	5.00e-15	72.00
IUUC-Oga-088561	Otolemur garnettii	32.70	1.00e-38	153.00
IUUC-Oar-090131	Ovis aries	35.69	3.00e-31	128.00
IUUC-Ptr-091301	Pan troglodytes	26.24	2.00e-21	95.50
IUUC-Pan-092810	Papio anubis	31.59	6.00e-36	144.00
IUUC-Psi-093091	Pelodiscus sinensis	32.87	1.00e-31	129.00
IUUC-Pno-095047	Phaeosphaeria nodorum	23.31	1.00e-14	73.90
IUUC-Ppa-095317	Physcomitrella patens	43.86	4.00e-77	281.00
IUUC-Pfo-096996	Poecilia formosa	32.43	1.00e-36	146.00
IUUC-Pab-097747	Pongo abelii	31.41	6.00e-34	137.00
IUUC-Pop-099609	Populus trichocarpa	67.79	2.00e-178	617.00
IUUC-Pca-100972	Procavia capensis	33.13	5.00e-30	124.00
IUUC-Ppe-101904	Prunus persica	66.89	3.00e-168	583.00
IUUC-Pva-102700	Pteropus vampyrus	34.06	1.00e-20	93.20
IUUC-Pgr-103616	Puccinia graminis	34.68	6.00e-23	101.00
IUUC-Ptt-103954	Puccinia triticina	34.68	3.00e-23	102.00
IUUC-Pte-104120	Pyrenophora teres	26.32	3.00e-22	99.00
IUUC-Pyt-104558	Pyrenophora triticirepentis	26.15	3.00e-22	99.00
IUUC-Rno-104933	Rattus norvegicus	31.78	2.00e-41	162.00
IUUC-Sha-107636	Sarcophilus harrisii	34.63	8.00e-40	157.00
IUUC-Sja-107783	Schizosaccharomyces japonicus	29.18	1.00e-29	122.00
IUUC-Spo-108192	Schizosaccharomyces pombe	27.08	3.00e-27	115.00
IUUC-Ssl-108384	Sclerotinia sclerotiorum	28.21	7.00e-23	100.00
IUUC-Smo-109498	Selaginella moellendorffii	45.25	3.00e-96	344.00
IUUC-Sit-110770	Setaria italica	46.35	5.00e-97	347.00
IUUC-Sly-111453	Solanum lycopersicum	67.26	5.00e-176	609.00
IUUC-Stu-112384	Solanum tuberosum	66.59	7.00e-155	540.00
IUUC-Sbi-113952	Sorghum bicolor	44.92	1.00e-94	338.00
IUUC-Sre-115223	Sporisorium reilianum	31.44	1.00e-20	94.00
IUUC-Ssc-115627	Sus scrofa	32.14	7.00e-36	144.00
IUUC-Tgu-117404	Taeniopygia guttata	36.70	1.00e-41	162.00
IUUC-Tru-117629	Takifugu rubripes	31.25	2.00e-36	145.00
IUUC-Tni-119839	Tetraodon nigroviridis	30.84	5.00e-27	114.00
IUUC-Tca-121766	Theobroma cacao	72.13	0.00e+00	650.00
IUUC-Tre-122047	Trichoderma reesei	28.06	3.00e-24	105.00
IUUC-Tvi-122668	Trichoderma virens	28.90	2.00e-24	105.00
IUUC-Tae-125742	Triticum aestivum	44.98	7.00e-93	333.00
IUUC-Tur-126673	Triticum urartu	42.63	9.00e-79	286.00
IUUC-Tme-127070	Tuber melanosporum	27.45	2.00e-28	119.00
IUUC-Tbe-127452	Tupaia belangeri	34.38	5.00e-17	81.30
IUUC-Ttr-128735	Tursiops truncatus	31.44	5.00e-32	130.00
IUUC-Uma-129521	Ustilago maydis	30.37	4.00e-20	92.40
IUUC-Xtr-131838	Xenopus tropicalis	32.87	2.00e-38	152.00
IUUC-Xma-134106	Xiphophorus maculatus	32.21	1.00e-34	139.00
IUUC-Yli-134551	Yarrowia lipolytica	28.09	2.00e-21	95.90
IUUC-Zma-134703	Zea mays	45.41	2.00e-93	334.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence