iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095808

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544904

Gene Name

PHYPADRAFT_116138

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S15_414V6	PP1S15_414V6.2	PP1S15_414V6.2
PP1S15_414V6	PP1S15_414V6.1	PP1S15_414V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	7.60e-67	226.6	102	448
ULD/UDP/UBQ/UBQ_Other	1.10e-06	29.2	1004	1065

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           Gl+Nlg+tCY+NSvLQcL++++ +r  ++   + +l       ++ ++l +l  lf++l ++kk av+   + ++l+  +       qqD qEf+
   Q: 102  GLTNLGATCYVNSVLQCLYMTRAFRTGVFA-AEMEL------VRSHPVLYQLGLLFAQLHSGKKIAVDSAPFASTLELDN-----AVQQDGQEFM 184
           9*****************************.33333......34679*****************************9665.....56******** PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvs...sreepfldlslpvpgkeetkkeslq 188
           + ll+ le+ l                         +++ + +++++++F+g+++  i+c +c+++s   ++  +f++l+l+v+g +     sl+
   Q: 185  KLLLSLLESVL-----------------------GMSQNVRARNVVQNVFRGTYSYVITCSKCGQESdlsKQAVDFYELELNVKGFT-----SLE 251
           ***********.......................457899*************************9976456678999*******99.....9** PP
   S: 189  dcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiav 283
           ++++++ +ee l+gen++ ce+ck +++a+  +kl++lP+vL ++LkRf f+ +++ ++k+++k++fp+++d+ p +++   + +++  Y+L+a+
   Q: 252  ESMNDYLSEEILQGENQWMCESCKTRVDATHCTKLRSLPPVLNFQLKRFVFNTKTSTKKKVTSKFSFPRTIDMGPCLST-YADIESRAVYDLSAI 345
           **************************************************************************98777.666677********* PP
   S: 284  vvHsG.slssGHYvayvknekgk.WllfdDskVtevkeeevleetg...............................................st 329
           +vH+G  ++sGHYva++k+++ + W++fdD++Vt++  +   e t+                                               ++
   Q: 346  LVHKGsMANSGHYVAHIKDDRTSeWWQFDDEQVTSLGFHPLGEATSqsaaskdavtqedasgrdqplqaivseasgsvdassrshseseiltsAD 440
           *****999***********77777**********9987777776667778899999999999999999999999999999999999999999999 PP
   S: 330  aYvlfYkr 337
           aY+l+Y r
   Q: 441  AYMLMYIR 448
           99999987 PP

ULD/UDP/UBQ/UBQ_Other

   S: 12   eltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiL.eddktLadyglkdgstihllek 72
           + +l+v+ ++tV +LK +i + lg+  + q+L +  ++L +d+ tLad+++ +g+ + ++++
   Q: 1004 RIQLNVSGDTTVFQLKLQIWESLGVVKDNQKLHIGKEELlDDNATLADLNILPGTNLWVMDT 1065
           56899****************************9655545***************9999876 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MSRLVRSRKN TTTNQHAAIQ GRIHASQCIT KDDVVQLFHI NKTPCQGCRA NSKDNPNCFC 60
CFVPPSNGVR KQGLWQKVAN SVTELGPDPG EALRPSQDSP SGLTNLGATC YVNSVLQCLY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTAGAT TGGTTCGAAG CCGGAAGAAC ACGACCACGA ACCAGCATGC CGCCATACAG 60
GGGTAACGCT CTTTTGCTTT TAGAAACCAT CTTATATATA AATAAATATA TATTTTGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006615--Pept_C19_DUSP
IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS51283--DUSP
PS50053--UBIQUITIN_2
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00240--ubiquitin
PF00443--UCH

SMART

SM00695--DUSP
SM00213--UBQ

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_116138

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000130	Aegilops tauschii	46.11	0.00e+00	900.00
IUUC-Aml-001357	Ailuropoda melanoleuca	25.56	6.00e-80	291.00
IUUC-Atr-002976	Amborella trichopoda	47.09	0.00e+00	949.00
IUUC-Apl-003773	Anas platyrhynchos	28.85	2.00e-77	283.00
IUUC-Aca-004466	Anolis carolinensis	33.39	7.00e-81	293.00
IUUC-Aly-006249	Arabidopsis lyrata	45.25	0.00e+00	903.00
IUUC-Ath-006700	Arabidopsis thaliana	46.53	0.00e+00	925.00
IUUC-Ame-011554	Astyanax mexicanus	28.68	1.00e-81	297.00
IUUC-Bta-012573	Bos taurus	29.02	1.00e-79	290.00
IUUC-Bdi-014149	Brachypodium distachyon	46.04	0.00e+00	917.00
IUUC-Bol-016289	Brassica oleracea	46.78	0.00e+00	903.00
IUUC-Bra-017494	Brassica rapa	46.02	0.00e+00	900.00
IUUC-Cja-019991	Callithrix jacchus	30.26	4.00e-78	285.00
IUUC-Cfa-020294	Canis familiaris	25.84	7.00e-84	305.00
IUUC-Cpo-021706	Cavia porcellus	26.68	3.00e-83	302.00
IUUC-Cre-022636	Chlamydomonas reinhardtii	42.18	7.00e-68	253.00
IUUC-Csa-023931	Chlorocebus sabaeus	25.88	1.00e-83	304.00
IUUC-Cin-025307	Ciona intestinalis	34.04	4.00e-35	140.00
IUUC-Csv-026006	Ciona savignyi	24.43	6.00e-57	215.00
IUUC-Cne-027065	Cryptococcus neoformans	26.18	1.00e-51	198.00
IUUC-Dre-027624	Danio rerio	29.02	9.00e-82	298.00
IUUC-Dno-029633	Dasypus novemcinctus	29.32	5.00e-70	258.00
IUUC-Dor-030809	Dipodomys ordii	35.67	2.00e-42	167.00
IUUC-Ete-032818	Echinops telfairi	29.91	2.00e-64	240.00
IUUC-Eca-033692	Equus caballus	27.89	1.00e-79	290.00
IUUC-Eeu-035185	Erinaceus europaeus	30.34	1.00e-30	128.00
IUUC-Fca-035676	Felis catus	26.25	2.00e-83	303.00
IUUC-Fal-036913	Ficedula albicollis	25.82	7.00e-85	308.00
IUUC-Gmo-038532	Gadus morhua	32.61	4.00e-82	299.00
IUUC-Gga-041041	Gallus gallus	28.37	5.00e-81	295.00
IUUC-Gac-042570	Gasterosteus aculeatus	30.52	2.00e-86	313.00
IUUC-Gma-044176	Glycine max	46.33	0.00e+00	917.00
IUUC-Ggo-045367	Gorilla gorilla	36.04	3.00e-55	209.00
IUUC-Hsa-046019	Homo sapiens	25.88	4.00e-83	302.00
IUUC-Hvu-047303	Hordeum vulgare	50.63	4.00e-145	507.00
IUUC-Itr-048319	Ictidomys tridecemlineatus	27.89	4.00e-79	289.00
IUUC-Lch-049989	Latimeria chalumnae	27.26	3.00e-89	322.00
IUUC-Lpe-051612	Leersia perrieri	46.44	0.00e+00	918.00
IUUC-Loc-052756	Lepisosteus oculatus	30.89	1.00e-78	287.00
IUUC-Laf-054043	Loxodonta africana	26.01	3.00e-85	309.00
IUUC-Mcc-054986	Macaca mulatta	26.35	5.00e-83	302.00
IUUC-Meu-056228	Macropus eugenii	37.10	3.00e-54	206.00
IUUC-Mtr-058762	Medicago truncatula	47.35	0.00e+00	902.00
IUUC-Mga-059896	Meleagris gallopavo	28.62	2.00e-78	286.00
IUUC-Mvi-060269	Microbotryum violaceum	29.86	1.00e-47	185.00
IUUC-Mmr-060887	Microcebus murinus	26.08	7.00e-84	305.00
IUUC-Mdo-062506	Monodelphis domestica	28.59	1.00e-79	290.00
IUUC-Mmu-063642	Mus musculus	27.05	3.00e-88	319.00
IUUC-Mac-064896	Musa acuminata	45.09	0.00e+00	902.00
IUUC-Mpu-066194	Mustela putorius furo	28.47	6.00e-80	291.00
IUUC-Mlu-067233	Myotis lucifugus	25.66	3.00e-80	293.00
IUUC-Nle-069052	Nomascus leucogenys	25.63	1.00e-82	300.00
IUUC-Opr-070890	Ochotona princeps	30.29	9.00e-72	264.00
IUUC-Ont-071450	Oreochromis niloticus	27.78	4.00e-92	332.00
IUUC-Ocu-073796	Oryctolagus cuniculus	26.45	1.00e-74	274.00
IUUC-Oba-075563	Oryza barthii	45.65	0.00e+00	918.00
IUUC-Obr-076394	Oryza brachyantha	46.20	0.00e+00	932.00
IUUC-Ogl-077339	Oryza glaberrima	58.04	3.00e-94	337.00
IUUC-Ogu-079007	Oryza glumaepatula	44.93	0.00e+00	888.00
IUUC-Oin-079997	Oryza indica	45.65	0.00e+00	918.00
IUUC-Olo-080364	Oryza longistaminata	45.77	0.00e+00	915.00
IUUC-Ome-081165	Oryza meridionalis	45.42	0.00e+00	885.00
IUUC-Oni-083026	Oryza nivara	45.65	0.00e+00	918.00
IUUC-Opu-083284	Oryza punctata	45.47	0.00e+00	901.00
IUUC-Oru-084797	Oryza rufipogon	45.65	0.00e+00	918.00
IUUC-Osa-086221	Oryza sativa	58.04	3.00e-94	337.00
IUUC-Ola-086568	Oryzias latipes	30.38	5.00e-84	305.00
IUUC-Oga-088687	Otolemur garnettii	30.32	1.00e-78	288.00
IUUC-Oar-090345	Ovis aries	28.78	1.00e-77	284.00
IUUC-Ptr-090734	Pan troglodytes	25.82	3.00e-83	302.00
IUUC-Pan-091704	Papio anubis	26.18	6.00e-81	295.00
IUUC-Psi-092937	Pelodiscus sinensis	26.09	1.00e-70	261.00
IUUC-Pab-098129	Pongo abelii	25.88	3.00e-83	303.00
IUUC-Pop-099738	Populus trichocarpa	47.05	0.00e+00	935.00
IUUC-Pca-100647	Procavia capensis	35.58	3.00e-42	166.00
IUUC-Ppe-102091	Prunus persica	47.15	0.00e+00	961.00
IUUC-Pva-102719	Pteropus vampyrus	25.58	1.00e-81	297.00
IUUC-Rno-105363	Rattus norvegicus	26.89	1.00e-86	313.00
IUUC-Sha-107620	Sarcophilus harrisii	28.27	1.00e-79	290.00
IUUC-Smo-109487	Selaginella moellendorffii	52.97	0.00e+00	980.00
IUUC-Sit-110683	Setaria italica	45.37	0.00e+00	906.00
IUUC-Sly-111377	Solanum lycopersicum	46.17	0.00e+00	887.00
IUUC-Stu-111969	Solanum tuberosum	49.55	3.00e-148	518.00
IUUC-Sar-113099	Sorex araneus	29.20	4.00e-72	266.00
IUUC-Sbi-113833	Sorghum bicolor	60.19	1.00e-94	338.00
IUUC-Ssc-115467	Sus scrofa	27.10	2.00e-31	128.00
IUUC-Tgu-117519	Taeniopygia guttata	27.39	2.00e-70	260.00
IUUC-Tru-117651	Takifugu rubripes	28.54	1.00e-85	311.00
IUUC-Tsy-119201	Tarsius syrichta	26.77	8.00e-66	244.00
IUUC-Tni-120840	Tetraodon nigroviridis	28.89	1.00e-84	307.00
IUUC-Tca-121674	Theobroma cacao	46.83	0.00e+00	957.00
IUUC-Tae-125814	Triticum aestivum	47.41	0.00e+00	912.00
IUUC-Tur-126599	Triticum urartu	45.79	0.00e+00	893.00
IUUC-Tbe-127782	Tupaia belangeri	26.25	2.00e-31	130.00
IUUC-Ttr-128312	Tursiops truncatus	27.07	9.00e-74	271.00
IUUC-Vpa-130348	Vicugna pacos	25.81	2.00e-79	290.00
IUUC-Vvi-131353	Vitis vinifera	47.64	0.00e+00	969.00
IUUC-Xtr-132172	Xenopus tropicalis	29.34	3.00e-49	189.00
IUUC-Xma-133263	Xiphophorus maculatus	29.14	5.00e-81	295.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence