iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002847

Ensembl Protein ID

ERN05111

UniProt Accession

W1PBX1; W1PBX1_AMBTC

Genbank Protein ID

ERN05111.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI394012

Gene Name

AMTR_s00053p00162370

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00053p00162370	ERN05111	ERN05111

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-22	79.4	215	249

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    HtdsvtclafsdtllvsGsdDgtikvWDlrtgvll 36
           H+ds++cla s +l+ sGs+D+t+kvW  ++ +++
   Q: 215  HADSISCLAVSQGLIYSGSWDKTLKVWKSSDLRCI 249
           9*********55***************98888886 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MAPPFPPSIP FSSPITHRRM ALSLCNQHPL SDSPKTPLLH SPLKKRQQKH SSEEEEEEED 60
EEEHLEISLA KSLSTTHFKI TPSRNPSPEA SVSYRSIAVI SGHMGSVSCL ALCGEFLLSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCACCAC CCTTCCCTCC TTCAATCCCC TTCTCCTCCC CAATCACCCA CCGCCGCATG 60
GCTCTTTCCC TCTGTAACCA ACATCCCCTC TCTGATTCCC CCAAAACCCC TCTCCTCCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005620	Arabidopsis lyrata	64.48	3.00e-120	424.00
IUUC-Ath-006729	Arabidopsis thaliana	63.80	3.00e-120	424.00
IUUC-Bdi-014229	Brachypodium distachyon	55.13	9.00e-88	315.00
IUUC-Bol-015324	Brassica oleracea	61.58	2.00e-114	404.00
IUUC-Bra-017666	Brassica rapa	62.24	5.00e-115	406.00
IUUC-Gma-043773	Glycine max	71.38	4.00e-125	439.00
IUUC-Hvu-047162	Hordeum vulgare	53.61	8.00e-65	239.00
IUUC-Lpe-050845	Leersia perrieri	53.68	3.00e-81	294.00
IUUC-Mtr-058525	Medicago truncatula	70.61	4.00e-127	446.00
IUUC-Mac-064928	Musa acuminata	62.66	3.00e-98	350.00
IUUC-Oba-075989	Oryza barthii	57.19	1.00e-101	362.00
IUUC-Obr-076522	Oryza brachyantha	57.27	5.00e-102	363.00
IUUC-Ogl-077747	Oryza glaberrima	56.33	5.00e-100	356.00
IUUC-Ogu-078306	Oryza glumaepatula	56.33	1.00e-99	355.00
IUUC-Oin-079397	Oryza indica	55.72	8.00e-99	352.00
IUUC-Olo-080627	Oryza longistaminata	57.85	3.00e-75	274.00
IUUC-Ome-081295	Oryza meridionalis	55.42	5.00e-98	350.00
IUUC-Oni-082259	Oryza nivara	56.33	5.00e-100	356.00
IUUC-Opu-083686	Oryza punctata	58.23	9.00e-103	365.00
IUUC-Oru-084598	Oryza rufipogon	55.72	8.00e-99	352.00
IUUC-Osa-085705	Oryza sativa	56.02	2.00e-95	341.00
IUUC-Pop-099167	Populus trichocarpa	71.57	1.00e-132	464.00
IUUC-Ppe-101179	Prunus persica	70.46	1.00e-133	468.00
IUUC-Sit-109966	Setaria italica	57.28	6.00e-94	336.00
IUUC-Sly-111222	Solanum lycopersicum	66.98	4.00e-124	436.00
IUUC-Stu-112315	Solanum tuberosum	70.66	2.00e-133	467.00
IUUC-Sbi-114323	Sorghum bicolor	54.03	2.00e-91	328.00
IUUC-Tca-121448	Theobroma cacao	68.62	8.00e-133	465.00
IUUC-Tae-123485	Triticum aestivum	55.03	2.00e-94	337.00
IUUC-Vvi-131470	Vitis vinifera	71.61	9.00e-133	465.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence