iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oin-079397

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGIOSGA005145	BGIOSGA005145-TA	BGIOSGA005145-PA

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-19	70.0	187	222

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    HtdsvtclafsdtllvsGsdDgtikvWDlrtgvllk 37
           H+ds++cla +d+ + sGs+D+t+kvW++++ ++l 
   Q: 187  HADSISCLAVHDGVVYSGSWDKTLKVWRISDLKCLE 222
           9********9779****************9999986 PP

Organism

Oryza indica

Protein Sequence
(Fasta)

MAMPLRDPTD RAAMSTPLLP RSAFVSSASF SSFSSVASFS STSSSFSDPA VPSDVVEALP 60
MSRDSFKALA VLRDHQGSVS SLSLCGEFLL SASTGADIVA WQQPDLRRFA RFGHGEGSVK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAATGC CATTGCGGGA TCCAACAGAC CGCGCTGCTA TGTCCACGCC GCTGCTCCCG 60
CGTTCCGCCT TCGTCTCCTC CGCATCGTTC TCCTCCTTTT CGTCCGTCGC CTCGTTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002847	Amborella trichopoda	55.72	1.00e-98	352.00
IUUC-Aly-005620	Arabidopsis lyrata	59.44	3.00e-111	394.00
IUUC-Ath-006729	Arabidopsis thaliana	57.22	1.00e-110	392.00
IUUC-Bdi-014229	Brachypodium distachyon	72.66	3.00e-133	467.00
IUUC-Bol-015324	Brassica oleracea	56.01	2.00e-104	372.00
IUUC-Bra-017033	Brassica rapa	57.38	2.00e-109	388.00
IUUC-Gma-043773	Glycine max	61.59	2.00e-109	388.00
IUUC-Hvu-047162	Hordeum vulgare	69.84	7.00e-99	352.00
IUUC-Lpe-050845	Leersia perrieri	75.65	7.00e-135	473.00
IUUC-Mtr-058525	Medicago truncatula	57.47	7.00e-107	379.00
IUUC-Mac-064928	Musa acuminata	56.80	1.00e-86	312.00
IUUC-Oba-075989	Oryza barthii	96.77	0.00e+00	711.00
IUUC-Obr-076522	Oryza brachyantha	91.44	0.00e+00	644.00
IUUC-Ogl-077747	Oryza glaberrima	98.38	0.00e+00	716.00
IUUC-Ogu-078306	Oryza glumaepatula	98.15	0.00e+00	693.00
IUUC-Olo-080627	Oryza longistaminata	92.03	2.00e-124	437.00
IUUC-Ome-081295	Oryza meridionalis	99.54	0.00e+00	721.00
IUUC-Oni-082259	Oryza nivara	98.38	0.00e+00	716.00
IUUC-Opu-083686	Oryza punctata	95.15	0.00e+00	670.00
IUUC-Oru-084598	Oryza rufipogon	100.00	0.00e+00	725.00
IUUC-Osa-085705	Oryza sativa	98.15	0.00e+00	696.00
IUUC-Pop-099519	Populus trichocarpa	61.63	1.00e-114	405.00
IUUC-Ppe-101179	Prunus persica	59.65	3.00e-112	397.00
IUUC-Sit-109966	Setaria italica	76.60	6.00e-147	513.00
IUUC-Sly-111222	Solanum lycopersicum	56.23	7.00e-102	363.00
IUUC-Stu-112315	Solanum tuberosum	59.71	6.00e-110	389.00
IUUC-Sbi-114323	Sorghum bicolor	68.87	4.00e-145	507.00
IUUC-Tca-121448	Theobroma cacao	60.81	2.00e-114	404.00
IUUC-Tae-123437	Triticum aestivum	73.35	8.00e-142	496.00
IUUC-Vvi-131470	Vitis vinifera	60.76	1.00e-111	395.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence