iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100094

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTR_0002s14150g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s14150	POPTR_0002s14150.1	POPTR_0002s14150.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-07	32.8	131	173

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ f  +d +++lp C H+fha+C++ w       + +++CPlCr
   Q: 131  CAVCLSTFepEDILRLLPlCCHAFHAHCIETW------LNSNQSCPLCR 173
           ******996655599999**************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSAPPYSFIP LNNTDEASDT SGGTKSPFQN LNSSILIIIL ILSVTLLVSV SLCFLLRILS 60
RRSLRHLSPS RTTAIATTIT TLSSNRLSSN NNHRVSPEDL ESSVSDSLPL FSFSSIKHRP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCGCTC CTCCATATTC GTTTATCCCT CTAAACAACA CCGACGAGGC CAGCGATACA 60
AGCGGAGGCA CCAAGTCGCC CTTTCAGAAC CTAAACTCAA GCATTTTGAT CATCATTTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0002s14150g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005918	Arabidopsis lyrata	53.88	1.00e-46	179.00
IUUC-Ath-007239	Arabidopsis thaliana	53.88	3.00e-45	175.00
IUUC-Bdi-014533	Brachypodium distachyon	39.70	2.00e-25	109.00
IUUC-Bra-017550	Brassica rapa	52.03	4.00e-45	174.00
IUUC-Gma-043797	Glycine max	48.85	2.00e-43	169.00
IUUC-Hvu-047273	Hordeum vulgare	37.26	6.00e-21	94.40
IUUC-Lpe-050711	Leersia perrieri	40.50	4.00e-18	85.10
IUUC-Mtr-058394	Medicago truncatula	51.18	2.00e-49	189.00
IUUC-Mac-065570	Musa acuminata	45.83	7.00e-18	84.30
IUUC-Obr-076640	Oryza brachyantha	39.35	2.00e-19	89.40
IUUC-Ogl-077705	Oryza glaberrima	41.84	1.00e-23	103.00
IUUC-Ogu-078864	Oryza glumaepatula	42.49	6.00e-25	107.00
IUUC-Oin-079511	Oryza indica	41.33	5.00e-24	103.00
IUUC-Ome-081312	Oryza meridionalis	40.70	1.00e-22	100.00
IUUC-Oni-082796	Oryza nivara	41.84	1.00e-23	103.00
IUUC-Opu-083307	Oryza punctata	37.81	4.00e-23	101.00
IUUC-Oru-084702	Oryza rufipogon	41.84	1.00e-23	103.00
IUUC-Osa-085669	Oryza sativa	34.13	8.00e-20	90.50
IUUC-Pno-094907	Phaeosphaeria nodorum	37.89	2.00e-11	63.20
IUUC-Ppe-101209	Prunus persica	50.00	9.00e-50	189.00
IUUC-Sit-110129	Setaria italica	40.00	2.00e-17	82.80
IUUC-Sly-111858	Solanum lycopersicum	39.27	8.00e-36	144.00
IUUC-Stu-112105	Solanum tuberosum	38.87	5.00e-35	141.00
IUUC-Sbi-114578	Sorghum bicolor	42.00	2.00e-20	92.80
IUUC-Tca-120922	Theobroma cacao	58.59	5.00e-55	207.00
IUUC-Tae-124222	Triticum aestivum	41.24	6.00e-23	101.00
IUUC-Vvi-130862	Vitis vinifera	52.24	1.00e-29	122.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence