iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076849

Ensembl Protein ID

OB03G16480.1

UniProt Accession

J3LKS2; J3LKS2_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB03G16480	OB03G16480.1	OB03G16480.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-20	72.9	50	86

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH + v+++a+ s+  ll+sGsdD  i +W++  + l
   Q: 50   GHLGCVNAIAWnSNgSLLLSGSDDTRIGIWSYANQQL 86
           89*********96679**************9876655 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MEKVRWRFAD GSVTDLLEAR GLHGTTDINK RMQFHSSLVE RLALEKELEG HLGCVNAIAW 60
NSNGSLLLSG SDDTRIGIWS YANQQLLHDI ETGHSANIFC TKFVPETSDE VVVSGAGDAE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGAGATGGA GAAGGTGCGG TGGCGCTTCG CGGACGGCAG CGTCACCGAC CTGCTGGAAG 60
CCCGAGGCCT CCATGGCACC ACCGTAAGTG CCCCCTCGGG ATGGCTCGGG GCGGTTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0005886--C:plasma membrane
GO:0009506--C:plasmodesma

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000083	Aegilops tauschii	74.96	0.00e+00	802.00
IUUC-Aml-001699	Ailuropoda melanoleuca	33.77	3.00e-42	166.00
IUUC-Atr-002509	Amborella trichopoda	60.57	2.00e-173	600.00
IUUC-Apl-003379	Anas platyrhynchos	27.85	1.00e-46	180.00
IUUC-Aca-005202	Anolis carolinensis	27.21	2.00e-73	269.00
IUUC-Aly-006475	Arabidopsis lyrata	58.55	0.00e+00	852.00
IUUC-Ath-007666	Arabidopsis thaliana	58.29	0.00e+00	849.00
IUUC-Acl-008211	Aspergillus clavatus	29.97	1.00e-33	137.00
IUUC-Afl-008592	Aspergillus flavus	29.28	3.00e-32	133.00
IUUC-Afu-008828	Aspergillus fumigatus	30.00	8.00e-33	135.00
IUUC-Ani-009263	Aspergillus nidulans	30.14	3.00e-33	136.00
IUUC-Ang-009671	Aspergillus niger	30.22	2.00e-33	137.00
IUUC-Aor-010229	Aspergillus oryzae	29.28	2.00e-32	133.00
IUUC-Ate-010555	Aspergillus terreus	30.03	1.00e-36	147.00
IUUC-Ame-011849	Astyanax mexicanus	33.66	2.00e-38	153.00
IUUC-Bta-013552	Bos taurus	31.35	6.00e-37	148.00
IUUC-Bdi-014100	Brachypodium distachyon	82.58	0.00e+00	1263.00
IUUC-Bol-016409	Brassica oleracea	56.32	0.00e+00	848.00
IUUC-Bra-016979	Brassica rapa	56.11	0.00e+00	847.00
IUUC-Cel-018561	Caenorhabditis elegans	30.08	4.00e-22	98.60
IUUC-Cja-019015	Callithrix jacchus	31.35	9.00e-37	148.00
IUUC-Cfa-020200	Canis familiaris	28.75	4.00e-47	182.00
IUUC-Cpo-021739	Cavia porcellus	33.77	3.00e-42	165.00
IUUC-Cre-022659	Chlamydomonas reinhardtii	33.10	6.00e-31	128.00
IUUC-Csa-023648	Chlorocebus sabaeus	33.77	3.00e-42	166.00
IUUC-Csv-026289	Ciona savignyi	29.45	2.00e-48	186.00
IUUC-Cme-027316	Cyanidioschyzon merolae	33.78	7.00e-33	135.00
IUUC-Dre-028745	Danio rerio	29.23	2.00e-74	272.00
IUUC-Dno-029403	Dasypus novemcinctus	33.77	5.00e-42	165.00
IUUC-Dor-030332	Dipodomys ordii	30.19	6.00e-32	131.00
IUUC-Dse-031250	Dothistroma septosporum	30.21	2.00e-32	133.00
IUUC-Dme-031811	Drosophila melanogaster	30.92	4.00e-48	184.00
IUUC-Eca-033783	Equus caballus	33.77	3.00e-42	165.00
IUUC-Eeu-034732	Erinaceus europaeus	27.13	3.00e-47	182.00
IUUC-Fca-036543	Felis catus	33.77	3.00e-42	166.00
IUUC-Fal-037245	Ficedula albicollis	28.21	6.00e-47	181.00
IUUC-Gmo-039346	Gadus morhua	29.88	1.00e-48	187.00
IUUC-Gga-041034	Gallus gallus	27.62	4.00e-46	178.00
IUUC-Gac-041297	Gasterosteus aculeatus	28.95	2.00e-72	266.00
IUUC-Gma-043128	Glycine max	56.08	0.00e+00	805.00
IUUC-Ggo-045309	Gorilla gorilla	33.77	3.00e-42	166.00
IUUC-Hsa-046622	Homo sapiens	33.77	3.00e-42	166.00
IUUC-Itr-048064	Ictidomys tridecemlineatus	31.46	2.00e-36	146.00
IUUC-Lch-049810	Latimeria chalumnae	34.09	1.00e-42	167.00
IUUC-Lpe-051600	Leersia perrieri	90.31	0.00e+00	1346.00
IUUC-Loc-052088	Lepisosteus oculatus	28.84	6.00e-73	267.00
IUUC-Lma-053032	Leptosphaeria maculans	29.39	5.00e-29	122.00
IUUC-Laf-054097	Loxodonta africana	28.75	3.00e-47	182.00
IUUC-Mcc-054848	Macaca mulatta	33.77	3.00e-42	166.00
IUUC-Mtr-057735	Medicago truncatula	57.35	0.00e+00	838.00
IUUC-Mga-059622	Meleagris gallopavo	27.62	3.00e-46	179.00
IUUC-Mmr-060709	Microcebus murinus	33.44	7.00e-42	164.00
IUUC-Mdo-062401	Monodelphis domestica	28.39	9.00e-48	184.00
IUUC-Mmu-063899	Mus musculus	27.77	9.00e-47	181.00
IUUC-Mac-064840	Musa acuminata	61.01	0.00e+00	928.00
IUUC-Mpu-066268	Mustela putorius furo	33.44	1.00e-41	163.00
IUUC-Mlu-067211	Myotis lucifugus	33.12	5.00e-41	160.00
IUUC-Nfi-068606	Neosartorya fischeri	30.28	1.00e-33	138.00
IUUC-Nle-070019	Nomascus leucogenys	33.77	3.00e-42	166.00
IUUC-Opr-071008	Ochotona princeps	27.94	4.00e-73	268.00
IUUC-Ont-072123	Oreochromis niloticus	29.28	2.00e-71	262.00
IUUC-Ocu-074166	Oryctolagus cuniculus	28.34	3.00e-73	268.00
IUUC-Oba-075298	Oryza barthii	93.08	0.00e+00	1361.00
IUUC-Ogl-077515	Oryza glaberrima	93.19	0.00e+00	1356.00
IUUC-Ogu-077968	Oryza glumaepatula	93.35	0.00e+00	1271.00
IUUC-Oin-079231	Oryza indica	89.56	0.00e+00	1175.00
IUUC-Olo-081045	Oryza longistaminata	90.65	0.00e+00	1377.00
IUUC-Ome-081395	Oryza meridionalis	90.12	0.00e+00	1351.00
IUUC-Oni-082801	Oryza nivara	92.95	0.00e+00	1359.00
IUUC-Opu-083585	Oryza punctata	90.98	0.00e+00	1394.00
IUUC-Oru-085163	Oryza rufipogon	92.67	0.00e+00	1353.00
IUUC-Osa-085550	Oryza sativa	92.03	2.00e-151	527.00
IUUC-Ola-086925	Oryzias latipes	30.95	3.00e-49	188.00
IUUC-Oga-088095	Otolemur garnettii	28.08	4.00e-72	265.00
IUUC-Oar-090285	Ovis aries	33.77	4.00e-42	165.00
IUUC-Ptr-091221	Pan troglodytes	33.77	3.00e-42	166.00
IUUC-Pan-091771	Papio anubis	33.77	3.00e-42	166.00
IUUC-Psi-093977	Pelodiscus sinensis	27.61	5.00e-48	184.00
IUUC-Ppa-095373	Physcomitrella patens	50.27	0.00e+00	703.00
IUUC-Pfo-096640	Poecilia formosa	28.93	1.00e-48	186.00
IUUC-Pab-098513	Pongo abelii	33.77	3.00e-42	166.00
IUUC-Pop-098837	Populus trichocarpa	59.24	0.00e+00	875.00
IUUC-Pca-101095	Procavia capensis	24.28	1.00e-28	120.00
IUUC-Ppe-101507	Prunus persica	60.13	0.00e+00	884.00
IUUC-Pva-102444	Pteropus vampyrus	33.77	3.00e-42	165.00
IUUC-Pte-104187	Pyrenophora teres	30.31	2.00e-28	120.00
IUUC-Pyt-104546	Pyrenophora triticirepentis	31.46	7.00e-30	125.00
IUUC-Rno-105952	Rattus norvegicus	34.08	4.00e-42	165.00
IUUC-Sha-106614	Sarcophilus harrisii	28.18	5.00e-47	181.00
IUUC-Sja-107779	Schizosaccharomyces japonicus	30.98	5.00e-30	125.00
IUUC-Spo-108129	Schizosaccharomyces pombe	31.16	1.00e-32	134.00
IUUC-Smo-108844	Selaginella moellendorffii	47.25	0.00e+00	627.00
IUUC-Sit-110154	Setaria italica	80.11	0.00e+00	1251.00
IUUC-Sly-111707	Solanum lycopersicum	58.39	0.00e+00	844.00
IUUC-Sar-113129	Sorex araneus	42.39	1.00e-20	93.60
IUUC-Sbi-113858	Sorghum bicolor	76.90	0.00e+00	1174.00
IUUC-Ssc-116275	Sus scrofa	33.77	3.00e-42	166.00
IUUC-Tgu-117507	Taeniopygia guttata	27.85	9.00e-47	180.00
IUUC-Tru-117969	Takifugu rubripes	30.55	5.00e-49	188.00
IUUC-Tsy-119374	Tarsius syrichta	33.60	9.00e-35	140.00
IUUC-Tni-119887	Tetraodon nigroviridis	30.88	5.00e-50	191.00
IUUC-Tca-121722	Theobroma cacao	60.87	0.00e+00	897.00
IUUC-Tae-124583	Triticum aestivum	81.58	0.00e+00	1220.00
IUUC-Tur-125968	Triticum urartu	73.33	0.00e+00	1058.00
IUUC-Tme-126910	Tuber melanosporum	28.61	4.00e-30	125.00
IUUC-Ttr-128390	Tursiops truncatus	33.77	3.00e-42	166.00
IUUC-Uma-129509	Ustilago maydis	26.91	1.00e-19	90.90
IUUC-Vpa-130145	Vicugna pacos	32.12	2.00e-36	147.00
IUUC-Vvi-131565	Vitis vinifera	60.96	0.00e+00	805.00
IUUC-Xtr-132290	Xenopus tropicalis	27.81	3.00e-43	169.00
IUUC-Xma-134025	Xiphophorus maculatus	29.06	2.00e-49	189.00
IUUC-Zma-135624	Zea mays	74.90	0.00e+00	1111.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence