iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Yli-134613

Ensembl Protein ID

CAG78910

UniProt Accession

Q6BZR5; Q6BZR5_YARLI

Genbank Protein ID

CAG78910.1

Protein Name

YALI0F31471p

Genbank Nucleotide ID

CR382132

Gene Name

YALI0_F31471g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
YALI0_F31471g	CAG78910	CAG78910

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.90e-12	43.8	243	270

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDl 30
            v +laf ++  ll++G+ D+t++++ +
   Q: 243  AVEGLAFhPThSLLLTGGFDKTLRLYQV 270
           5889****77799************975 PP

Organism

Yarrowia lipolytica

Protein Sequence
(Fasta)

MEDSMDVDSS DDEVPDKDEE ELELEKAVFG DLEGFEMGIK NIALEEAEEE DSDDSHDSDD 60
ENDFNKMEDN QLFFVDGGDG QKYHSDDDSD DDSDSSMDSD TLDETLEEHG GRAAWADSDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGACT CCATGGACGT GGACTCTTCT GATGACGAGG TGCCGGATAA GGACGAGGAG 60
GAGCTGGAGC TGGAGAAGGC CGTCTTTGGA GATCTAGAGG GCTTTGAGAT GGGTATCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011659--PD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07676--PD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

yli:YALI0F31471g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000184	Aegilops tauschii	29.20	2.00e-57	214.00
IUUC-Aml-002252	Ailuropoda melanoleuca	30.57	4.00e-49	187.00
IUUC-Atr-002575	Amborella trichopoda	30.38	1.00e-56	212.00
IUUC-Aly-006512	Arabidopsis lyrata	29.36	5.00e-54	203.00
IUUC-Ath-007244	Arabidopsis thaliana	29.37	3.00e-52	197.00
IUUC-Ago-007895	Ashbya gossypii	37.34	6.00e-82	296.00
IUUC-Acl-008343	Aspergillus clavatus	36.50	3.00e-76	277.00
IUUC-Afl-008445	Aspergillus flavus	35.97	3.00e-80	290.00
IUUC-Aor-009986	Aspergillus oryzae	36.19	3.00e-79	287.00
IUUC-Ame-011338	Astyanax mexicanus	31.95	4.00e-49	186.00
IUUC-Bgr-012201	Blumeria graminis	33.27	3.00e-72	264.00
IUUC-Bta-013058	Bos taurus	30.86	1.00e-51	195.00
IUUC-Bci-013619	Botrytis cinerea	35.31	9.00e-75	272.00
IUUC-Bdi-014771	Brachypodium distachyon	29.12	8.00e-57	212.00
IUUC-Bol-015230	Brassica oleracea	29.38	2.00e-49	187.00
IUUC-Bra-017041	Brassica rapa	29.93	2.00e-48	184.00
IUUC-Cel-018293	Caenorhabditis elegans	25.39	5.00e-33	133.00
IUUC-Cja-019503	Callithrix jacchus	31.14	6.00e-51	192.00
IUUC-Cfa-020743	Canis familiaris	31.07	3.00e-50	190.00
IUUC-Cpo-021488	Cavia porcellus	31.71	1.00e-49	188.00
IUUC-Cre-022926	Chlamydomonas reinhardtii	32.35	7.00e-52	196.00
IUUC-Csa-023110	Chlorocebus sabaeus	30.57	3.00e-50	191.00
IUUC-Cin-025208	Ciona intestinalis	30.61	2.00e-40	157.00
IUUC-Cme-027351	Cyanidioschyzon merolae	28.45	3.00e-36	144.00
IUUC-Dre-027524	Danio rerio	26.22	4.00e-38	150.00
IUUC-Dno-029243	Dasypus novemcinctus	30.86	6.00e-51	193.00
IUUC-Dor-030110	Dipodomys ordii	32.62	9.00e-50	189.00
IUUC-Dse-031217	Dothistroma septosporum	34.51	6.00e-69	253.00
IUUC-Dme-031999	Drosophila melanogaster	26.28	1.00e-38	152.00
IUUC-Eca-034350	Equus caballus	30.29	6.00e-50	189.00
IUUC-Eeu-034991	Erinaceus europaeus	30.86	6.00e-49	186.00
IUUC-Fal-036614	Ficedula albicollis	28.82	6.00e-46	176.00
IUUC-Gmo-039183	Gadus morhua	31.71	4.00e-47	180.00
IUUC-Gga-040922	Gallus gallus	27.54	4.00e-48	183.00
IUUC-Gac-041475	Gasterosteus aculeatus	29.15	6.00e-42	163.00
IUUC-Gma-042732	Glycine max	29.60	5.00e-59	219.00
IUUC-Ggo-044517	Gorilla gorilla	30.86	4.00e-51	193.00
IUUC-Hsa-045741	Homo sapiens	30.86	4.00e-51	193.00
IUUC-Hvu-047463	Hordeum vulgare	32.42	1.00e-22	97.40
IUUC-Itr-048128	Ictidomys tridecemlineatus	32.00	3.00e-51	194.00
IUUC-Kpa-049335	Komagataella pastoris	38.66	2.00e-90	323.00
IUUC-Lch-049816	Latimeria chalumnae	32.84	9.00e-50	189.00
IUUC-Lpe-051140	Leersia perrieri	32.30	3.00e-58	217.00
IUUC-Loc-051942	Lepisosteus oculatus	30.70	2.00e-45	174.00
IUUC-Laf-054245	Loxodonta africana	31.14	2.00e-50	191.00
IUUC-Meu-056300	Macropus eugenii	27.22	5.00e-38	149.00
IUUC-Mor-057184	Magnaporthe oryzae	33.91	4.00e-60	223.00
IUUC-Mtr-058019	Medicago truncatula	30.80	8.00e-58	216.00
IUUC-Mga-060179	Meleagris gallopavo	28.27	3.00e-49	187.00
IUUC-Mvi-060435	Microbotryum violaceum	32.28	3.00e-46	177.00
IUUC-Mdo-062187	Monodelphis domestica	30.97	5.00e-46	176.00
IUUC-Mmu-063386	Mus musculus	31.71	4.00e-51	193.00
IUUC-Mac-065509	Musa acuminata	25.16	3.00e-09	56.20
IUUC-Mpu-066084	Mustela putorius furo	31.14	1.00e-49	189.00
IUUC-Mlu-068130	Myotis lucifugus	29.71	5.00e-49	186.00
IUUC-Nle-069743	Nomascus leucogenys	29.14	2.00e-42	165.00
IUUC-Opr-071111	Ochotona princeps	31.52	9.00e-52	196.00
IUUC-Ont-071979	Oreochromis niloticus	30.95	8.00e-46	176.00
IUUC-Ocu-073754	Oryctolagus cuniculus	28.10	1.00e-51	195.00
IUUC-Oba-075007	Oryza barthii	31.61	1.00e-58	218.00
IUUC-Obr-076447	Oryza brachyantha	31.91	1.00e-58	218.00
IUUC-Ogl-077733	Oryza glaberrima	31.61	1.00e-58	219.00
IUUC-Ogu-078828	Oryza glumaepatula	31.91	7.00e-59	219.00
IUUC-Oin-080152	Oryza indica	31.91	5.00e-59	219.00
IUUC-Olo-080983	Oryza longistaminata	31.84	2.00e-58	218.00
IUUC-Ome-081868	Oryza meridionalis	25.18	7.00e-09	56.60
IUUC-Oni-082443	Oryza nivara	31.91	7.00e-59	219.00
IUUC-Opu-083771	Oryza punctata	30.56	2.00e-56	211.00
IUUC-Oru-084272	Oryza rufipogon	31.91	6.00e-59	219.00
IUUC-Osa-085885	Oryza sativa	31.91	4.00e-59	220.00
IUUC-Olu-087644	Ostreococcus lucimarinus	25.00	1.00e-16	78.60
IUUC-Oga-088834	Otolemur garnettii	32.00	2.00e-52	198.00
IUUC-Oar-089712	Ovis aries	30.86	5.00e-51	193.00
IUUC-Pan-092561	Papio anubis	30.57	7.00e-50	189.00
IUUC-Ppa-095397	Physcomitrella patens	34.52	6.00e-62	229.00
IUUC-Pfo-097068	Poecilia formosa	30.68	1.00e-45	175.00
IUUC-Pop-099471	Populus trichocarpa	30.69	3.00e-51	194.00
IUUC-Ppe-101446	Prunus persica	30.63	1.00e-53	201.00
IUUC-Pva-102851	Pteropus vampyrus	29.51	2.00e-46	177.00
IUUC-Pgr-103370	Puccinia graminis	27.48	1.00e-46	179.00
IUUC-Ptt-103838	Puccinia triticina	25.00	5.00e-34	137.00
IUUC-Rno-104910	Rattus norvegicus	29.71	2.00e-48	184.00
IUUC-Sce-106258	Saccharomyces cerevisiae	36.64	4.00e-85	306.00
IUUC-Sja-107746	Schizosaccharomyces japonicus	40.22	3.00e-97	347.00
IUUC-Spo-108268	Schizosaccharomyces pombe	41.27	4.00e-93	333.00
IUUC-Smo-108815	Selaginella moellendorffii	33.71	3.00e-63	234.00
IUUC-Sit-109706	Setaria italica	30.34	2.00e-57	214.00
IUUC-Sly-111533	Solanum lycopersicum	30.25	2.00e-57	214.00
IUUC-Stu-112853	Solanum tuberosum	30.72	7.00e-58	216.00
IUUC-Sbi-114747	Sorghum bicolor	31.32	1.00e-60	225.00
IUUC-Ssc-115916	Sus scrofa	30.86	5.00e-52	196.00
IUUC-Tgu-117291	Taeniopygia guttata	30.52	8.00e-46	176.00
IUUC-Tru-118724	Takifugu rubripes	32.45	3.00e-48	184.00
IUUC-Tsy-118928	Tarsius syrichta	32.59	1.00e-30	125.00
IUUC-Tca-121229	Theobroma cacao	30.58	3.00e-61	227.00
IUUC-Tae-125218	Triticum aestivum	29.20	3.00e-57	214.00
IUUC-Tur-126082	Triticum urartu	26.59	1.00e-33	134.00
IUUC-Ttr-128904	Tursiops truncatus	31.49	2.00e-41	161.00
IUUC-Vpa-130817	Vicugna pacos	30.95	4.00e-52	197.00
IUUC-Vvi-130982	Vitis vinifera	30.00	5.00e-54	203.00
IUUC-Xtr-132971	Xenopus tropicalis	30.26	9.00e-54	202.00
IUUC-Xma-133391	Xiphophorus maculatus	30.38	3.00e-45	174.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence