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Tag Content
iUUCD ID IUUC-Ptr-091658
Ensembl Protein ID ENSPTRP00000046782.3
UniProt Accession H2R492; H2R492_PANTR
Genbank Protein ID JAA15125.1
Protein Name DDB1 and CUL4 associated factor 4
Genbank Nucleotide ID AACZ03096366
Gene Name DCAF4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPTRG00000006507.5 ENSPTRT00000046440.3 ENSPTRP00000046782.3
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.90e-08 32.8 369 406
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
    H + vt+++ +d +l ++ g+ik+WDlrt ++++
   Q: 369 HDSAVTSVRIlQDeQYLMASDMAGKIKLWDLRTTKCVR 406
    999******998889****9999************987 PP
   

Organism Pan troglodytes
Protein Sequence
(Fasta)
MKKSRWQSRR RHGRRSHQQN PWFRLRDSED RSDSRAAQPA HDSSHGDDES PSTSSGTAGT 60
SSVPELPGFY FDPEKKRYFR LLPGHNNCNP LTKESIRQKE MESKRLRLLQ EEDRRKKIAR 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ptr-091658|E3,WD_repeat|Pan troglodytes
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TCCAACTCCT GCAGAGCTGA GCCCGAAGGG AATCCGGAAG GGACACGCTG AACAGGTAGG 60
ACTGTGCTGC CTGTGGTGCC TACTGGCGTC GATTCGAGGG CTGCCGCGCT CCCGCTGCAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ptr-091658|E3,WD_repeat|Pan troglodytes
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0071011--C:precatalytic spliceosome
GO:0005682--C:U5 snRNP
GO:0008380--P:RNA splicing

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001176 Aegilops tauschii 39.82 1.00e-13 69.30
IUUC-Aml-001929 Ailuropoda melanoleuca 87.06 0.00e+00 823.00
IUUC-Atr-002556 Amborella trichopoda 30.59 3.00e-14 73.20
IUUC-Apl-003177 Anas platyrhynchos 70.62 4.00e-175 607.00
IUUC-Aca-004610 Anolis carolinensis 65.58 0.00e+00 627.00
IUUC-Aly-005883 Arabidopsis lyrata 23.74 5.00e-17 82.40
IUUC-Ath-006668 Arabidopsis thaliana 23.48 2.00e-17 83.60
IUUC-Afl-008573 Aspergillus flavus 21.78 3.00e-07 49.70
IUUC-Aor-010226 Aspergillus oryzae 21.29 7.00e-05 41.60
IUUC-Ate-010340 Aspergillus terreus 22.40 2.00e-10 60.10
IUUC-Ame-010690 Astyanax mexicanus 60.25 8.00e-156 543.00
IUUC-Bta-012668 Bos taurus 81.50 0.00e+00 739.00
IUUC-Bdi-014848 Brachypodium distachyon 34.01 2.00e-14 73.60
IUUC-Bol-016035 Brassica oleracea 33.14 2.00e-15 77.00
IUUC-Bra-016687 Brassica rapa 32.00 2.00e-14 73.60
IUUC-Cja-019560 Callithrix jacchus 89.31 6.00e-83 298.00
IUUC-Cfa-020441 Canis familiaris 86.85 0.00e+00 798.00
IUUC-Cpo-021299 Cavia porcellus 78.45 0.00e+00 782.00
IUUC-Csa-023185 Chlorocebus sabaeus 97.06 0.00e+00 917.00
IUUC-Cho-024353 Choloepus hoffmanni 80.25 0.00e+00 795.00
IUUC-Dno-029890 Dasypus novemcinctus 80.38 0.00e+00 741.00
IUUC-Dor-030618 Dipodomys ordii 86.81 3.00e-84 305.00
IUUC-Ete-032557 Echinops telfairi 68.02 2.00e-134 472.00
IUUC-Eca-033466 Equus caballus 84.70 0.00e+00 830.00
IUUC-Eeu-034995 Erinaceus europaeus 72.93 2.00e-146 511.00
IUUC-Fca-036199 Felis catus 86.16 0.00e+00 802.00
IUUC-Fal-036717 Ficedula albicollis 68.97 7.00e-172 596.00
IUUC-Gmo-039201 Gadus morhua 60.46 5.00e-152 530.00
IUUC-Gga-040398 Gallus gallus 70.90 7.00e-162 563.00
IUUC-Gac-042391 Gasterosteus aculeatus 60.27 1.00e-159 556.00
IUUC-Gma-043880 Glycine max 28.30 3.00e-12 66.60
IUUC-Ggo-045348 Gorilla gorilla 99.16 0.00e+00 931.00
IUUC-Hsa-046746 Homo sapiens 99.58 0.00e+00 937.00
IUUC-Hvu-047825 Hordeum vulgare 33.14 2.00e-15 77.00
IUUC-Itr-048472 Ictidomys tridecemlineatus 84.07 0.00e+00 817.00
IUUC-Lch-050272 Latimeria chalumnae 59.41 4.00e-151 528.00
IUUC-Lpe-051618 Leersia perrieri 28.00 8.00e-14 71.60
IUUC-Loc-051772 Lepisosteus oculatus 61.86 6.00e-164 570.00
IUUC-Laf-054577 Loxodonta africana 71.40 0.00e+00 629.00
IUUC-Mcc-055284 Macaca mulatta 82.18 0.00e+00 735.00
IUUC-Meu-056721 Macropus eugenii 62.69 5.00e-88 317.00
IUUC-Mtr-058472 Medicago truncatula 30.38 1.00e-13 71.20
IUUC-Mga-059238 Meleagris gallopavo 70.62 1.00e-164 572.00
IUUC-Mmr-061642 Microcebus murinus 90.19 0.00e+00 718.00
IUUC-Mdo-062030 Monodelphis domestica 74.02 0.00e+00 639.00
IUUC-Mmu-063420 Mus musculus 81.21 0.00e+00 795.00
IUUC-Mac-065231 Musa acuminata 35.77 2.00e-17 83.60
IUUC-Mpu-065692 Mustela putorius furo 87.27 0.00e+00 824.00
IUUC-Mlu-067428 Myotis lucifugus 82.76 0.00e+00 788.00
IUUC-Nle-070145 Nomascus leucogenys 98.32 0.00e+00 948.00
IUUC-Opr-071081 Ochotona princeps 77.00 0.00e+00 710.00
IUUC-Ont-071302 Oreochromis niloticus 62.21 5.00e-156 543.00
IUUC-Oan-073494 Ornithorhynchus anatinus 56.06 4.00e-128 451.00
IUUC-Ocu-073925 Oryctolagus cuniculus 86.41 0.00e+00 766.00
IUUC-Oba-075797 Oryza barthii 30.26 7.00e-13 68.60
IUUC-Obr-076014 Oryza brachyantha 31.58 3.00e-14 73.20
IUUC-Ogl-077201 Oryza glaberrima 30.26 8.00e-13 68.20
IUUC-Ogu-078056 Oryza glumaepatula 30.26 7.00e-13 68.60
IUUC-Oin-080062 Oryza indica 30.26 6.00e-13 68.90
IUUC-Olo-080869 Oryza longistaminata 30.26 3.00e-13 70.90
IUUC-Ome-081820 Oryza meridionalis 30.26 3.00e-13 69.70
IUUC-Oni-082497 Oryza nivara 30.26 6.00e-13 68.60
IUUC-Opu-083780 Oryza punctata 38.82 1.00e-11 65.10
IUUC-Oru-085091 Oryza rufipogon 30.26 6.00e-13 68.60
IUUC-Osa-085725 Oryza sativa 30.26 6.00e-13 68.60
IUUC-Ola-087033 Oryzias latipes 60.83 4.00e-144 504.00
IUUC-Oga-088861 Otolemur garnettii 85.56 0.00e+00 798.00
IUUC-Oar-090048 Ovis aries 83.58 0.00e+00 788.00
IUUC-Pan-092873 Papio anubis 95.38 0.00e+00 932.00
IUUC-Psi-093421 Pelodiscus sinensis 70.23 1.00e-175 609.00
IUUC-Pma-094216 Petromyzon marinus 45.00 5.00e-94 337.00
IUUC-Ppa-095186 Physcomitrella patens 47.37 3.00e-10 60.10
IUUC-Pfo-096178 Poecilia formosa 58.11 4.00e-147 514.00
IUUC-Pab-098037 Pongo abelii 75.63 3.00e-176 610.00
IUUC-Pop-099334 Populus trichocarpa 34.16 4.00e-16 77.80
IUUC-Pca-100845 Procavia capensis 70.53 0.00e+00 678.00
IUUC-Pva-103203 Pteropus vampyrus 85.12 0.00e+00 819.00
IUUC-Rno-105675 Rattus norvegicus 82.14 0.00e+00 771.00
IUUC-Sha-107389 Sarcophilus harrisii 72.87 0.00e+00 643.00
IUUC-Sja-107847 Schizosaccharomyces japonicus 24.46 4.00e-14 72.40
IUUC-Spo-108190 Schizosaccharomyces pombe 24.75 3.00e-12 65.90
IUUC-Sit-110421 Setaria italica 43.56 1.00e-15 77.00
IUUC-Sly-110888 Solanum lycopersicum 23.88 1.00e-07 51.60
IUUC-Sar-113185 Sorex araneus 64.79 3.00e-161 561.00
IUUC-Sbi-114182 Sorghum bicolor 40.00 1.00e-14 72.80
IUUC-Ssc-116005 Sus scrofa 86.16 0.00e+00 824.00
IUUC-Tgu-117023 Taeniopygia guttata 66.82 3.00e-165 574.00
IUUC-Tru-118221 Takifugu rubripes 58.89 8.00e-153 533.00
IUUC-Tsy-118784 Tarsius syrichta 75.63 0.00e+00 633.00
IUUC-Tni-120072 Tetraodon nigroviridis 60.09 6.00e-154 536.00
IUUC-Tca-121267 Theobroma cacao 26.06 6.00e-18 85.50
IUUC-Tae-124900 Triticum aestivum 32.56 1.00e-15 76.60
IUUC-Tur-126655 Triticum urartu 32.56 2.00e-15 76.30
IUUC-Tbe-127243 Tupaia belangeri 76.01 0.00e+00 689.00
IUUC-Ttr-129237 Tursiops truncatus 76.89 0.00e+00 720.00
IUUC-Vvi-131184 Vitis vinifera 27.54 3.00e-10 59.70
IUUC-Xtr-132006 Xenopus tropicalis 50.80 7.00e-122 430.00
Created Date 25-Jun-2017

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