iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121044

Ensembl Protein ID

EOY07674

UniProt Accession

A0A061EZM8; A0A061EZM8_THECC

Genbank Protein ID

EOY07674.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001883

Gene Name

TCM_022053

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_022053	EOY07674	EOY07674

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-06	29.4	205	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e++   +d ++ lpC+H+fh  C+  w       +k+ +CP Cr
   Q: 205  CVICKEEMregRD-VCKLPCQHLFHWMCILPW------LKKKNTCPCCR 246
           ********66333.******************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MMMEEETTMM AALSTLRPSQ LSDLSYSILS LSFHQRRRLC FLLSSPCLFS LTLHHLHSLS 60
LPNKTLLIAR HLLFSLHHIT RHFQPPPLRP IQFSAAMKHR DLDAVLLLLF LCETHQHNPK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAATTTCTA AATCCTCCCC CGGTTGTATA AAGGTAAATG GAGACATATT AGTCAGGATA 60
AAAGGACGCA GCTCTCAAAC CTCCCACGGA CTTTGCAGTG AAAGCTCGCC AAAGCAGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0009501--C:amyloplast
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0009630--P:gravitropism

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002887	Amborella trichopoda	36.23	4.00e-25	107.00
IUUC-Aly-005538	Arabidopsis lyrata	54.18	6.00e-50	190.00
IUUC-Ath-006921	Arabidopsis thaliana	55.15	1.00e-49	189.00
IUUC-Bdi-014905	Brachypodium distachyon	34.76	9.00e-20	89.40
IUUC-Bol-016141	Brassica oleracea	58.82	4.00e-52	197.00
IUUC-Bra-017782	Brassica rapa	61.50	5.00e-51	193.00
IUUC-Gma-042685	Glycine max	60.62	3.00e-52	197.00
IUUC-Lpe-051463	Leersia perrieri	39.72	2.00e-23	101.00
IUUC-Mac-065543	Musa acuminata	37.57	4.00e-27	114.00
IUUC-Oba-075686	Oryza barthii	36.81	5.00e-21	93.60
IUUC-Ogu-078394	Oryza glumaepatula	36.81	5.00e-21	93.60
IUUC-Oin-079750	Oryza indica	36.81	1.00e-21	95.90
IUUC-Oni-082513	Oryza nivara	36.81	8.00e-22	96.70
IUUC-Oru-084366	Oryza rufipogon	36.81	6.00e-21	93.20
IUUC-Osa-085930	Oryza sativa	36.81	6.00e-22	97.10
IUUC-Pop-099681	Populus trichocarpa	62.74	3.00e-58	217.00
IUUC-Sly-111721	Solanum lycopersicum	51.29	2.00e-51	195.00
IUUC-Stu-112332	Solanum tuberosum	46.64	6.00e-45	173.00
IUUC-Sbi-114490	Sorghum bicolor	40.77	3.00e-15	74.30
IUUC-Vvi-131513	Vitis vinifera	58.84	6.00e-61	226.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence