iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126433

Ensembl Protein ID

TRIUR3_26144-P1

UniProt Accession

M7ZLC8; M7ZLC8_TRIUA

Genbank Protein ID

EMS53135.1

Protein Name

Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2

Genbank Nucleotide ID

KD198303

Gene Name

TRIUR3_26144

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_26144	TRIUR3_26144-T1	TRIUR3_26144-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.20e-08	33.6	627	667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCle f+d  +++pC H  +++C+   w     +s  + +CP+Cr
   Q: 627  CPICLEAFED-AVLTPCAHRLCRECIlSSW-----QSPAAGLCPVCR 667
           **********.888***********99999.....6777779****8 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MAKKGERAEQ VAAVGRIPNE WARCLLPLLK EGKVKVEALC KSAPEVLSIM DTVLLSASIY 60
INSSMFRDQK QSPPKATRAA TEDSTFHPLP ALFKVIGITP FMKAAFTPED LYSRKRPIER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAAGA AGGGCGAGAG GGCGGAGCAA GTGGCGGCGG TGCGCGCGGT GCTCGGCGAG 60
GAGACGCCGG AGATGGACAT CATCCGCGCG CTCCACATGG CCGGCGACGA CCCCACCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0016818--F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003139	Amborella trichopoda	68.59	0.00e+00	1055.00
IUUC-Aly-006331	Arabidopsis lyrata	67.17	0.00e+00	999.00
IUUC-Ath-007517	Arabidopsis thaliana	66.85	0.00e+00	996.00
IUUC-Bdi-014646	Brachypodium distachyon	90.98	0.00e+00	1287.00
IUUC-Bol-015484	Brassica oleracea	65.11	0.00e+00	964.00
IUUC-Bra-016925	Brassica rapa	65.39	0.00e+00	969.00
IUUC-Gma-042995	Glycine max	65.16	0.00e+00	1010.00
IUUC-Hvu-047495	Hordeum vulgare	97.10	0.00e+00	1451.00
IUUC-Lpe-051584	Leersia perrieri	82.39	0.00e+00	1160.00
IUUC-Mtr-058565	Medicago truncatula	65.07	0.00e+00	1005.00
IUUC-Mla-058867	Melampsora laricipopulina	33.81	5.00e-76	278.00
IUUC-Mvi-060322	Microbotryum violaceum	31.75	1.00e-89	324.00
IUUC-Oba-075937	Oryza barthii	81.00	0.00e+00	1181.00
IUUC-Obr-076403	Oryza brachyantha	84.60	0.00e+00	1193.00
IUUC-Ogl-077573	Oryza glaberrima	85.85	0.00e+00	1276.00
IUUC-Ogu-077957	Oryza glumaepatula	80.72	0.00e+00	1174.00
IUUC-Oin-079146	Oryza indica	85.71	0.00e+00	1275.00
IUUC-Olo-080437	Oryza longistaminata	70.60	0.00e+00	986.00
IUUC-Ome-081448	Oryza meridionalis	84.05	0.00e+00	1216.00
IUUC-Oni-082389	Oryza nivara	80.86	0.00e+00	1179.00
IUUC-Opu-083322	Oryza punctata	84.74	0.00e+00	1199.00
IUUC-Oru-085066	Oryza rufipogon	80.72	0.00e+00	1179.00
IUUC-Osa-085686	Oryza sativa	85.55	0.00e+00	1206.00
IUUC-Pop-099320	Populus trichocarpa	68.46	0.00e+00	1041.00
IUUC-Ppe-101820	Prunus persica	68.05	0.00e+00	1014.00
IUUC-Pgr-103454	Puccinia graminis	31.87	1.00e-83	304.00
IUUC-Sit-110076	Setaria italica	86.41	0.00e+00	1242.00
IUUC-Sly-111908	Solanum lycopersicum	67.22	0.00e+00	1011.00
IUUC-Sbi-113927	Sorghum bicolor	86.55	0.00e+00	1211.00
IUUC-Tca-121137	Theobroma cacao	68.92	0.00e+00	1065.00
IUUC-Tae-125934	Triticum aestivum	99.86	0.00e+00	1402.00
IUUC-Tbe-127642	Tupaia belangeri	35.04	1.00e-41	164.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence