iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099152

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_785447; POPTR_0006s28960g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s28960	POPTR_0006s28960.1	POPTR_0006s28960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-06	29.3	448	489

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++   d++  lpC H +h  C+++w       s +  CP+C+
   Q: 448  CSICQEEYadGDEVGRLPCEHRYHVACIHQW------LSLKNWCPICK 489
           ********65333878***************......666666****6 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDDYSCKRAG DGSLVPRKGS AHVLRDSANN RDQKAQFCNR IGCSGRLNSS KGAQISSEKA 60
KSSRPRPLFS SSAGGKETIG SSSRTCSVIT KPRNSLQEPR KKFSSRLEAD SSETGSVQDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGAGGGAAT TTGCAGGTTA TTGTGATGCT GGAAATAACA CCGCTTGTGG TTGCTATTAT 60
AATCTGAAAG AATCTTGGTT GACGATTACT CTGAATTCCT CTGTTGGCAC TTTCGCTGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0006s28960g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002613	Amborella trichopoda	57.41	6.00e-50	191.00
IUUC-Apl-003783	Anas platyrhynchos	37.37	2.00e-15	75.90
IUUC-Aly-006317	Arabidopsis lyrata	48.03	3.00e-76	278.00
IUUC-Bol-015868	Brassica oleracea	38.52	1.00e-63	236.00
IUUC-Bra-017471	Brassica rapa	41.41	3.00e-70	258.00
IUUC-Dre-027722	Danio rerio	40.40	4.00e-15	75.10
IUUC-Dor-030727	Dipodomys ordii	37.37	3.00e-15	75.50
IUUC-Fal-037200	Ficedula albicollis	37.37	3.00e-15	75.50
IUUC-Gga-040277	Gallus gallus	37.37	2.00e-15	75.50
IUUC-Mga-059245	Meleagris gallopavo	39.00	2.00e-15	73.90
IUUC-Psi-092966	Pelodiscus sinensis	36.36	4.00e-15	75.10
IUUC-Tgu-117345	Taeniopygia guttata	37.37	3.00e-15	75.50
IUUC-Tni-120063	Tetraodon nigroviridis	32.65	5.00e-13	69.70
IUUC-Tae-125190	Triticum aestivum	54.92	4.00e-35	141.00
IUUC-Xtr-132317	Xenopus tropicalis	37.25	5.00e-13	67.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence