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Tag Content
iUUCD ID IUUC-Aly-005510
Ensembl Protein ID fgenesh2_kg.6__2753__AT5G27570.1
UniProt Accession D7M6A1; D7M6A1_ARALL
Genbank Protein ID EFH48549.1
Protein Name Putative uncharacterized protein
Genbank Nucleotide ID GL348718
Gene Name ARALYDRAFT_489619
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.6__2753__AT5G27570.1 fgenesh2_kg.6__2753__AT5G27570.1 fgenesh2_kg.6__2753__AT5G27570.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.80e-27 94.9 215 245
E3 adaptor/Cullin RING/APC_C/CDC20 5.90e-121 404.1 80 385
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
    gHtd+v++l++ s++ l+sG++D+++++WD
   Q: 215 GHTDEVCGLKWseSGKQLASGGNDKVVHIWD 245
    8**********877799************** PP
   


   E3 adaptor/Cullin RING/APC_C/CDC20

   S: 2    ekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkge 77
    ek+ldap + ddfylnLldW+s+nvla+aLg+s+yl +a++ + s+l + eek vts++w+++g+ la+G +++e
   Q: 80 EKILDAPGIVDDFYLNLLDWGSSNVLALALGHSIYLRDASSDSTSMLVTIdEEKGPVTSINWMQDGCTLAIGLDNSE 156
    79***********************************************9888999********************* PP
   S: 78 veiyDveekkkvrtl.tghsarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLa 153
    v+i+D ++++++rtl gh++rvg+L+Wn+++l++G+rdg+i +dvr++ + + +h++evCGlkw+e++k+La
   Q: 157 VQIWDSASNSQLRTLrGGHQTRVGSLAWNNHILTTGGRDGKIINNDVRIRSSIVGSYLGHTDEVCGLKWSESGKQLA 233
    ***************889*********************************************************** PP
   S: 154 sGGnDnsvsvwdassse......PlkkfkehkaavkaiawsPwqkslLasGGGtaDrcikfwntltgalleeidtgs 224
    sGGnD +v++wd s + l++f+ h+aa ka+aw+P+q +lLa+GGG Dr+ikfwnt tga+l++++tgs
   Q: 234 SGGNDKVVHIWDRSLASsnstrkWLQRFEGHTAATKALAWCPFQANLLATGGGVGDRTIKFWNTHTGACLNSVETGS 310
    ************86544445667899*************************************************** PP
   S: 225 qvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetlrfwklfdk 299
    qvcsllws+k++el+s+hGf++n++tlwkyps+ k+ael+gh++Rvl++a spdg ++++aagDetlr+w++f
   Q: 311 QVCSLLWSNKERELLSSHGFTQNQLTLWKYPSMLKIAELNGHTSRVLYMAQSPDGCTVASAAGDETLRLWNVFGV 385
    ************************************************************************975 PP
   

Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MDFDYAPYAL TEGRKPKVEV TSASRKAYMN QLAETMNQNR TRILAFRNKP KALLSSNHSD 60
SPHEQSKSVK RRRYIPQNSE KILDAPGIVD DFYLNLLDWG SSNVLALALG HSIYLRDASS 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Aly-005510|E3,WD_repeat;E3,CDC20|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGATTTCG ACTATGCTCC CTACGCTCTT ACCGAAGGAA GAAAACCTAA AGTTGAGGTA 60
ACTTCAGCGT CAAGGAAAGC GTACATGAAC CAATTGGCTG AGACTATGAA TCAGAATCGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Aly-005510|E3,WD_repeat;E3,CDC20|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG aly:ARALYDRAFT_489619
Orthology
iUUCD ID Species Identity E-value Score
Created Date 25-Jun-2017

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