• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
iUUCD ID IUUC-Aly-005500
Ensembl Protein ID fgenesh2_kg.6__2997__AT4G10150.1
UniProt Accession D7LY22; D7LY22_ARALL
Genbank Protein ID EFH48754.1
Protein Name Zinc finger family protein
Genbank Nucleotide ID GL348718
Gene Name ARALYDRAFT_489863
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.6__2997__AT4G10150.1 fgenesh2_kg.6__2997__AT4G10150.1 fgenesh2_kg.6__2997__AT4G10150.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 5.00e-07 30.8 111 153
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
    C++Cl d+ ++ + +p CgH+fh +C+ +w + +CPlCr
   Q: 111 CSVCLADYqaEEKLQQMPaCGHTFHMECIDRW------LTSHTTCPLCR 153
    9*******65333556669*************......**********8 PP
   

Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MSYSDPNQNP IPETYAPSNS TESEKLKLYQ AFIFSVPICF TFIVLFVLYV IYLRRNSTTN 60
VDWSSLGMRG GIFVPTNNNL STAELGLSKD VREMLPIVIY KESFTVKDSQ CSVCLADYQA 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Aly-005500|E3,RING|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCTTACA GTGACCCAAA CCAAAACCCA ATTCCAGAAA CTTACGCTCC ATCGAACTCA 60
ACTGAATCCG AGAAACTGAA ACTTTACCAA GCTTTTATCT TCTCTGTTCC AATCTGTTTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Aly-005500|E3,RING|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG aly:ARALYDRAFT_489863
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ath-007076 Arabidopsis thaliana 91.14 5.00e-127 445.00
IUUC-Aor-010095 Aspergillus oryzae 53.33 2.00e-12 65.10
IUUC-Bdi-014087 Brachypodium distachyon 44.23 1.00e-38 152.00
IUUC-Bol-016221 Brassica oleracea 59.72 3.00e-64 237.00
IUUC-Bra-017017 Brassica rapa 72.34 5.00e-58 215.00
IUUC-Gma-043458 Glycine max 56.20 9.00e-37 145.00
IUUC-Lpe-051002 Leersia perrieri 41.59 1.00e-38 152.00
IUUC-Mtr-058067 Medicago truncatula 57.82 3.00e-41 160.00
IUUC-Mvi-060267 Microbotryum violaceum 33.66 3.00e-11 63.50
IUUC-Mac-065514 Musa acuminata 39.21 5.00e-36 143.00
IUUC-Oba-075393 Oryza barthii 41.35 3.00e-39 154.00
IUUC-Obr-076149 Oryza brachyantha 45.21 2.00e-38 151.00
IUUC-Ogl-077140 Oryza glaberrima 41.35 3.00e-39 154.00
IUUC-Ogu-078926 Oryza glumaepatula 41.35 3.00e-39 154.00
IUUC-Oin-080003 Oryza indica 43.83 8.00e-33 132.00
IUUC-Ome-081399 Oryza meridionalis 39.92 2.00e-38 151.00
IUUC-Oni-082750 Oryza nivara 41.35 4.00e-39 153.00
IUUC-Opu-083446 Oryza punctata 39.41 2.00e-38 151.00
IUUC-Oru-084873 Oryza rufipogon 41.35 3.00e-39 154.00
IUUC-Osa-085898 Oryza sativa 41.35 3.00e-39 154.00
IUUC-Pop-099279 Populus trichocarpa 48.12 5.00e-27 113.00
IUUC-Ppe-101232 Prunus persica 43.82 1.00e-37 148.00
IUUC-Pyt-104807 Pyrenophora triticirepentis 48.98 8.00e-11 61.20
IUUC-Smo-109214 Selaginella moellendorffii 44.78 1.00e-25 109.00
IUUC-Sit-110610 Setaria italica 50.30 3.00e-38 150.00
IUUC-Sly-111610 Solanum lycopersicum 59.38 2.00e-44 171.00
IUUC-Stu-112875 Solanum tuberosum 58.12 5.00e-43 167.00
IUUC-Sbi-114101 Sorghum bicolor 50.91 1.00e-39 155.00
IUUC-Tca-121298 Theobroma cacao 56.50 2.00e-45 175.00
IUUC-Tae-124847 Triticum aestivum 52.63 2.00e-37 148.00
IUUC-Tur-126109 Triticum urartu 51.97 4.00e-37 147.00
IUUC-Vvi-131331 Vitis vinifera 47.50 1.00e-44 172.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved