iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114741

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G152200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g013220	Sb01g013220.1	Sb01g013220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	6.60e-08	33.5	54	94

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 99   daglldrlpeeilveilklldkeellraarvcrrwq.elas 138
           +++  + lp+ei+ eil +l++++l r+++v+r+w+  ++s
   Q: 54   KSTAASALPDEIVEEILARLPAKSLRRFQCVSRSWHgLITS 94
           4567889****************************944444 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGKDAADQIG FEFLLLLLYP VIYLNRGRQG QQLPQQQLMK TATMGATASP KRIKSTAASA 60
LPDEIVEEIL ARLPAKSLRR FQCVSRSWHG LITSPPFRQL HSSRRASQPR GLFVRPAGYV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCAAAG ACGCAGCAGA CCAGATCGGA TTCGAATTTT TGTTGCTTCT ATTGTACCCG 60
GTCATTTATT TAAACAGAGG CAGGCAGGGG CAGCAGCTAC CGCAGCAGCA GTTGATGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR013187--F-box-assoc_dom_typ3
IPR017451--F-box-assoc_interact_dom
IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box
PF08268--FBA_3

SMART

SM00256--FBOX

KEGG

sbi:SORBI_01g013220

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001049	Aegilops tauschii	38.55	8.00e-112	397.00
IUUC-Aly-006102	Arabidopsis lyrata	25.08	4.00e-12	65.10
IUUC-Ath-007525	Arabidopsis thaliana	25.17	1.00e-11	63.20
IUUC-Bdi-014492	Brachypodium distachyon	35.80	6.00e-106	377.00
IUUC-Bol-016596	Brassica oleracea	27.48	5.00e-16	78.20
IUUC-Bra-016667	Brassica rapa	27.15	7.00e-16	77.40
IUUC-Cja-019337	Callithrix jacchus	45.71	1.70e-02	33.10
IUUC-Gmo-038855	Gadus morhua	42.11	7.60e-02	32.30
IUUC-Ggo-045390	Gorilla gorilla	40.91	1.20e-02	33.50
IUUC-Hsa-046995	Homo sapiens	40.91	1.20e-02	33.50
IUUC-Mdo-062898	Monodelphis domestica	44.23	9.00e-03	33.90
IUUC-Nle-069629	Nomascus leucogenys	40.00	1.20e-02	33.50
IUUC-Ptr-090695	Pan troglodytes	40.91	1.20e-02	33.50
IUUC-Ppe-101741	Prunus persica	28.96	2.00e-16	79.00
IUUC-Rno-105479	Rattus norvegicus	27.36	5.10e-01	30.40
IUUC-Tae-124080	Triticum aestivum	39.07	3.00e-118	418.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence