iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075407

Ensembl Protein ID

OBART06G22620.1

UniProt Accession

A0A0D3GJ78; A0A0D3GJ78_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART06G22620	OBART06G22620.1	OBART06G22620.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-26	92.0	485	516
UBD/Beta-Prp	3.50e-56	191.5	322	516

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gHtd+vt+l+f  d + l+s+s Dgt+++WD+
   Q: 485  GHTDRVTDLCFsEDgKWLISSSMDGTLRIWDI 516
           8**********955699**************5 PP

UBD/Beta-Prp

   S: 67   lvtgseD.rtikvwdls....tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.......tlsghdgvvncvvvhpd 148
            vt+++D   ++vw l+       ++   +g ++ + ++++s+ g++   G++   i+ ++l++g    +       +++ hdg v +++ + +
   Q: 322  VVTCHTDtPQAYVWRLQnfviGEHILTPSSGSKSPIKACAISACGNFTFLGTEGGWIEKFNLQSGISRGSyidtslaIKRAHDGEVVGLACDAT 415
           6999***8899***8884443444444455*****************************999999887778889999***************** PP
   S: 149  gnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgss 242
           +  l+s+++ + +++Wd k+ kl  +l     +sv+++++++    l+++++d  ++l+d  + ++vr+++ghtd v+++ fs+++++l+s s+
   Q: 416  NGSLISAGYGGDIKVWDFKSCKLKSRLD--IGKSVTKIAYHRANGLLATVADDMVLILFDTVAMKMVRRFEGHTDRVTDLCFSEDGKWLISSSM 507
           ***************************5..599************************************************************* PP
   S: 243  DgsiriWdl 251
           Dg++riWd+
   Q: 508  DGTLRIWDI 516
           *******97 PP

Organism

Oryza barthii

Protein Sequence
(Fasta)

MGIFEPFRAI GYITAGGVPF SVQRLGTETF VAVSVGKAFH VYNCAKLNLV LSGPQLPKKI 60
RALASYKDYT FAAYGSDIAV FKRTDQVVTW SKHEEKINIL YPFGEYILSA DIKGNVFIWS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCCTTCTC CCGCCGCCGC TCCAAAACCC CCACCTCTAA AACCCTCGCC GGCGGCGCAC 60
CCCCACCCAA GCTGAGCGGC CAAACCCTCG ACACGCATCG TCAGCAGCAG CAGCCGCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	74.45	0.00e+00	1252.00
IUUC-Aml-002289	Ailuropoda melanoleuca	33.04	5.00e-122	431.00
IUUC-Atr-002859	Amborella trichopoda	61.33	0.00e+00	986.00
IUUC-Apl-003505	Anas platyrhynchos	35.20	8.00e-114	404.00
IUUC-Aca-004339	Anolis carolinensis	32.06	8.00e-117	414.00
IUUC-Aly-005913	Arabidopsis lyrata	62.58	0.00e+00	1078.00
IUUC-Ath-006767	Arabidopsis thaliana	62.10	0.00e+00	1070.00
IUUC-Ago-007763	Ashbya gossypii	27.47	1.00e-92	334.00
IUUC-Acl-008275	Aspergillus clavatus	30.53	5.00e-74	271.00
IUUC-Afl-008457	Aspergillus flavus	31.65	1.00e-79	290.00
IUUC-Afu-008914	Aspergillus fumigatus	28.08	2.00e-77	283.00
IUUC-Ani-009225	Aspergillus nidulans	31.22	2.00e-70	259.00
IUUC-Aor-010046	Aspergillus oryzae	31.15	4.00e-85	309.00
IUUC-Ate-010337	Aspergillus terreus	27.46	1.00e-86	314.00
IUUC-Ame-010963	Astyanax mexicanus	32.56	8.00e-113	400.00
IUUC-Bgr-011973	Blumeria graminis	28.41	6.00e-81	295.00
IUUC-Bta-012462	Bos taurus	32.89	2.00e-119	422.00
IUUC-Bci-013940	Botrytis cinerea	30.65	5.00e-97	348.00
IUUC-Bdi-014725	Brachypodium distachyon	80.55	0.00e+00	1424.00
IUUC-Bol-016534	Brassica oleracea	62.17	0.00e+00	1073.00
IUUC-Bra-016781	Brassica rapa	60.64	0.00e+00	1082.00
IUUC-Cel-018581	Caenorhabditis elegans	27.48	2.00e-65	243.00
IUUC-Cja-019675	Callithrix jacchus	32.82	6.00e-129	454.00
IUUC-Cfa-020118	Canis familiaris	33.48	2.00e-121	429.00
IUUC-Cpo-021798	Cavia porcellus	32.78	2.00e-117	416.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	31.90	1.00e-38	153.00
IUUC-Csa-023547	Chlorocebus sabaeus	32.80	3.00e-119	422.00
IUUC-Cho-024518	Choloepus hoffmanni	28.26	6.00e-73	268.00
IUUC-Cin-025339	Ciona intestinalis	31.93	2.00e-126	446.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	29.30	1.00e-78	287.00
IUUC-Cne-026859	Cryptococcus neoformans	36.24	8.00e-114	404.00
IUUC-Cme-027173	Cyanidioschyzon merolae	27.99	2.00e-64	239.00
IUUC-Dre-027733	Danio rerio	31.19	5.00e-110	391.00
IUUC-Dno-029439	Dasypus novemcinctus	32.60	2.00e-116	412.00
IUUC-Dor-030329	Dipodomys ordii	33.97	2.00e-62	233.00
IUUC-Dse-031511	Dothistroma septosporum	26.87	2.00e-79	290.00
IUUC-Dme-031694	Drosophila melanogaster	30.69	1.00e-109	390.00
IUUC-Ete-032930	Echinops telfairi	40.11	3.00e-106	379.00
IUUC-Eca-033302	Equus caballus	32.71	3.00e-119	422.00
IUUC-Eeu-034516	Erinaceus europaeus	32.89	2.00e-128	452.00
IUUC-Fca-036064	Felis catus	32.90	1.00e-118	420.00
IUUC-Fal-037024	Ficedula albicollis	33.37	4.00e-123	435.00
IUUC-Fox-037787	Fusarium oxysporum	29.99	1.00e-75	277.00
IUUC-Fso-038378	Fusarium solani	30.02	3.00e-80	292.00
IUUC-Gmo-039637	Gadus morhua	35.31	9.00e-67	247.00
IUUC-Ggr-040108	Gaeumannomyces graminis	29.93	1.00e-74	274.00
IUUC-Gga-040982	Gallus gallus	33.08	9.00e-133	467.00
IUUC-Gac-041565	Gasterosteus aculeatus	32.41	2.00e-114	406.00
IUUC-Gma-043414	Glycine max	65.20	0.00e+00	1129.00
IUUC-Ggo-045463	Gorilla gorilla	32.53	3.00e-119	422.00
IUUC-Hsa-045675	Homo sapiens	32.57	5.00e-120	424.00
IUUC-Hvu-047352	Hordeum vulgare	88.15	0.00e+00	1268.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	31.98	2.00e-128	452.00
IUUC-Kpa-049164	Komagataella pastoris	28.73	8.00e-93	334.00
IUUC-Lch-050476	Latimeria chalumnae	31.94	4.00e-125	441.00
IUUC-Lpe-051556	Leersia perrieri	82.22	0.00e+00	1333.00
IUUC-Loc-052820	Lepisosteus oculatus	33.59	8.00e-133	467.00
IUUC-Lma-052961	Leptosphaeria maculans	28.67	5.00e-77	282.00
IUUC-Laf-054006	Loxodonta africana	31.29	4.00e-110	392.00
IUUC-Mcc-055037	Macaca mulatta	32.49	1.00e-119	423.00
IUUC-Mor-057280	Magnaporthe oryzae	28.84	7.00e-74	271.00
IUUC-Mpo-057408	Magnaporthe poae	29.22	6.00e-70	258.00
IUUC-Mtr-058473	Medicago truncatula	65.04	0.00e+00	1145.00
IUUC-Mla-058892	Melampsora laricipopulina	34.62	1.00e-103	370.00
IUUC-Mga-059598	Meleagris gallopavo	33.70	5.00e-100	358.00
IUUC-Mvi-060334	Microbotryum violaceum	35.26	1.00e-102	367.00
IUUC-Mmr-061239	Microcebus murinus	32.97	7.00e-119	421.00
IUUC-Mdo-062471	Monodelphis domestica	33.44	4.00e-118	418.00
IUUC-Mmu-063872	Mus musculus	33.41	8.00e-128	450.00
IUUC-Mac-064631	Musa acuminata	74.96	0.00e+00	1088.00
IUUC-Mpu-066039	Mustela putorius furo	33.37	2.00e-132	466.00
IUUC-Mlu-067485	Myotis lucifugus	33.15	2.00e-117	416.00
IUUC-Nfi-068319	Neosartorya fischeri	28.26	7.00e-90	324.00
IUUC-Ncr-068725	Neurospora crassa	29.55	3.00e-78	286.00
IUUC-Nle-069050	Nomascus leucogenys	32.64	6.00e-121	427.00
IUUC-Opr-070437	Ochotona princeps	42.16	4.00e-40	159.00
IUUC-Ont-071574	Oreochromis niloticus	31.67	2.00e-115	409.00
IUUC-Oan-072826	Ornithorhynchus anatinus	33.63	3.00e-131	462.00
IUUC-Ocu-073995	Oryctolagus cuniculus	32.72	6.00e-115	408.00
IUUC-Obr-076451	Oryza brachyantha	85.62	0.00e+00	1545.00
IUUC-Ogl-077535	Oryza glaberrima	90.20	0.00e+00	1572.00
IUUC-Ogu-077995	Oryza glumaepatula	97.64	0.00e+00	1649.00
IUUC-Oin-079431	Oryza indica	90.37	0.00e+00	1572.00
IUUC-Olo-080495	Oryza longistaminata	97.27	0.00e+00	1609.00
IUUC-Oni-082336	Oryza nivara	94.68	0.00e+00	1588.00
IUUC-Opu-084028	Oryza punctata	91.76	0.00e+00	1455.00
IUUC-Oru-084500	Oryza rufipogon	97.99	0.00e+00	1631.00
IUUC-Osa-086242	Oryza sativa	90.37	0.00e+00	1570.00
IUUC-Ola-086612	Oryzias latipes	35.91	2.00e-93	336.00
IUUC-Olu-087703	Ostreococcus lucimarinus	34.25	8.00e-135	474.00
IUUC-Oga-088572	Otolemur garnettii	32.53	1.00e-119	424.00
IUUC-Oar-090363	Ovis aries	33.85	2.00e-124	439.00
IUUC-Ptr-090477	Pan troglodytes	32.35	7.00e-118	417.00
IUUC-Pan-092914	Papio anubis	32.49	5.00e-120	424.00
IUUC-Psi-093019	Pelodiscus sinensis	32.24	3.00e-115	409.00
IUUC-Pma-094303	Petromyzon marinus	30.26	8.00e-90	324.00
IUUC-Pno-094938	Phaeosphaeria nodorum	29.95	2.00e-64	240.00
IUUC-Ppa-095720	Physcomitrella patens	46.25	0.00e+00	795.00
IUUC-Pfo-097034	Poecilia formosa	31.56	2.00e-114	406.00
IUUC-Pab-097669	Pongo abelii	32.57	1.00e-121	430.00
IUUC-Pop-098786	Populus trichocarpa	60.70	0.00e+00	1001.00
IUUC-Pca-101097	Procavia capensis	38.05	3.00e-40	159.00
IUUC-Ppe-101430	Prunus persica	65.75	0.00e+00	1183.00
IUUC-Pva-103152	Pteropus vampyrus	33.33	6.00e-124	437.00
IUUC-Pgr-103517	Puccinia graminis	31.82	7.00e-112	398.00
IUUC-Ptt-103697	Puccinia triticina	30.81	4.00e-88	318.00
IUUC-Pte-104121	Pyrenophora teres	27.42	2.00e-79	290.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	27.92	4.00e-81	295.00
IUUC-Rno-105435	Rattus norvegicus	32.97	4.00e-123	435.00
IUUC-Sce-106202	Saccharomyces cerevisiae	28.31	5.00e-80	291.00
IUUC-Sha-107272	Sarcophilus harrisii	33.83	2.00e-114	406.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	33.41	5.00e-125	441.00
IUUC-Spo-108256	Schizosaccharomyces pombe	33.48	6.00e-131	461.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	29.72	3.00e-90	326.00
IUUC-Smo-109445	Selaginella moellendorffii	50.00	0.00e+00	845.00
IUUC-Sit-110051	Setaria italica	80.44	0.00e+00	1427.00
IUUC-Sly-111181	Solanum lycopersicum	62.89	0.00e+00	1068.00
IUUC-Stu-112018	Solanum tuberosum	63.34	0.00e+00	1096.00
IUUC-Sar-113348	Sorex araneus	35.22	1.00e-100	360.00
IUUC-Sbi-114282	Sorghum bicolor	79.09	0.00e+00	1449.00
IUUC-Sre-114946	Sporisorium reilianum	32.43	2.00e-66	246.00
IUUC-Ssc-115287	Sus scrofa	33.22	3.00e-123	435.00
IUUC-Tgu-117138	Taeniopygia guttata	31.23	2.00e-95	343.00
IUUC-Tru-118232	Takifugu rubripes	31.70	3.00e-120	425.00
IUUC-Tsy-119502	Tarsius syrichta	27.81	5.00e-85	308.00
IUUC-Tni-120378	Tetraodon nigroviridis	33.89	1.00e-120	427.00
IUUC-Tca-121506	Theobroma cacao	65.75	0.00e+00	1124.00
IUUC-Tre-122166	Trichoderma reesei	29.82	1.00e-85	310.00
IUUC-Tvi-122385	Trichoderma virens	30.55	1.00e-90	327.00
IUUC-Tae-122836	Triticum aestivum	79.71	0.00e+00	1457.00
IUUC-Tur-126490	Triticum urartu	83.94	0.00e+00	1368.00
IUUC-Tme-127157	Tuber melanosporum	30.06	8.00e-94	337.00
IUUC-Tbe-127981	Tupaia belangeri	37.40	9.00e-112	397.00
IUUC-Ttr-128886	Tursiops truncatus	32.60	3.00e-117	416.00
IUUC-Uma-129439	Ustilago maydis	32.59	9.00e-73	268.00
IUUC-Vda-129760	Verticillium dahliae	29.75	1.00e-85	311.00
IUUC-Vpa-130456	Vicugna pacos	32.78	8.00e-120	424.00
IUUC-Vvi-131086	Vitis vinifera	65.75	0.00e+00	1178.00
IUUC-Xtr-131829	Xenopus tropicalis	34.25	6.00e-143	501.00
IUUC-Xma-133588	Xiphophorus maculatus	30.25	1.00e-110	394.00
IUUC-Yli-134328	Yarrowia lipolytica	32.71	5.00e-81	295.00
IUUC-Zma-135808	Zea mays	77.68	0.00e+00	1427.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence