iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111893

Ensembl Protein ID

Solyc12g010670.1.1

UniProt Accession

K4DCF4; K4DCF4_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g010670.1	Solyc12g010670.1.1	Solyc12g010670.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.20e-09	36.2	37	102
E3 activity/RING/RING	3.70e-08	34.5	42	91

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwl.......asggk......tcPvtrqplteedlvPn 58
           p+ f C I l+l +dPvv+ +G+ y   +I kw+       +   +      +cPv+++++++++l+P 
   Q: 37   PQGFECNICLDLVHDPVVTLCGHLYCWPCIYKWIhynalssE---NidnkqpKCPVCKAEVSQKTLIPL 102
           889*******************************98876440...24566779**************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw.....pglknssskefrCPlCr 46
           C iCl+   d p+v+ CgH+++  C++kw       + n  +k+ +CP+C+
   Q: 42   CNICLDLVHD-PVVTLCGHLYCWPCIYKWihynaLSSENIDNKQPKCPVCK 91
           99********.9999**************99998888888899999****7 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MALEQIFQDQ IVEFDQRDNS FEKWKTSNLD KLEENSPQGF ECNICLDLVH DPVVTLCGHL 60
YCWPCIYKWI HYNALSSENI DNKQPKCPVC KAEVSQKTLI PLYGRGQATK TSTKAMSLGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTTAG AACAAATTTT TCAAGACCAA ATAGTGGAAT TTGATCAACG CGATAATTCT 60
TTTGAAAAAT GGAAGACAAG CAATCTCGAT AAACTTGAAG AAAATTCACC TCAAGGTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sly:101253976

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005578	Arabidopsis lyrata	40.00	3.00e-31	127.00
IUUC-Bol-016203	Brassica oleracea	40.31	2.00e-32	130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence