iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__1608__AT4G26400.2	fgenesh2_kg.7__1608__AT4G26400.2	fgenesh2_kg.7__1608__AT4G26400.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.30e-07	30.1	242	283

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+df++g   + +pC+H fh  C+  w         + +CP+Cr
   Q: 242  CSICLDDFDKGseAKEMPCKHKFHIRCIVPW------LELHSSCPVCR 283
           ********77744667***************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAARYWCHMC SQMVNPIIDA EIKCPFCQSG FVEEMSREIN GGSSSSLREV QDPEIDFGTD 60
RALSLWGPIL LGMMSNPRRR RRFRRTEFGV DNDEVNGVAD VDGNDSNVDN DRHHHRRQRH 120

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Nucleotide Sequence
(Fasta)

TCTTCGTCTT CGTCTTCGTC TTCCTTTCCT CCTCCATTCC TCTTTTCTTC TTCTCCCACC 60
ATTTCTGCAG AAGAAGACAA ATAAAGAGCT CTCATTTATC TTGGTGGAGA TCTAAAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0010200--P:response to chitin

KEGG

aly:ARALYDRAFT_492175

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007234	Arabidopsis thaliana	90.76	4.00e-147	513.00
IUUC-Bol-016290	Brassica oleracea	73.67	3.00e-121	427.00
IUUC-Bra-017827	Brassica rapa	74.33	1.00e-119	422.00
IUUC-Csv-025892	Ciona savignyi	39.13	2.00e-19	87.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence