iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016269

Ensembl Protein ID

Bo4g143870.1

UniProt Accession

A0A0D3C0P2; A0A0D3C0P2_BRAOL

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo4g143870	Bo4g143870.1	Bo4g143870.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-32	113.4	34	104

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +p+ef CpIs +lM+dPv++++Gitydr+sIekw++sg++tcPvt++ lt  d++Pn+t+r++iq wc e 
   Q: 34   IPPEFQCPISIDLMKDPVIISTGITYDRTSIEKWIDSGNNTCPVTNTVLTTFDQIPNHTIRKMIQGWCVEI 104
           8*******************************************************************875 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MGFTWGMRLR GASKKKIAPV MSWSESTSEP DITIPPEFQC PISIDLMKDP VIISTGITYD 60
RTSIEKWIDS GNNTCPVTNT VLTTFDQIPN HTIRKMIQGW CVEIGSSLIE RIPTPRVPLM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTTTTA CATGGGGAAT GAGACTACGT GGAGCTAGCA AGAAGAAGAT AGCTCCGGTA 60
ATGAGTTGGT CGGAATCGAC ATCGGAGCCG GATATAACGA TTCCGCCGGA GTTTCAATGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0010200--P:response to chitin

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006171	Arabidopsis lyrata	79.67	1.00e-174	605.00
IUUC-Ath-007692	Arabidopsis thaliana	77.78	8.00e-173	599.00
IUUC-Bdi-014644	Brachypodium distachyon	39.71	6.00e-67	248.00
IUUC-Bra-017285	Brassica rapa	96.51	0.00e+00	803.00
IUUC-Gma-043233	Glycine max	43.41	4.00e-85	308.00
IUUC-Hvu-047616	Hordeum vulgare	36.48	1.00e-65	243.00
IUUC-Lpe-050701	Leersia perrieri	38.81	4.00e-54	205.00
IUUC-Oba-075080	Oryza barthii	33.07	3.00e-36	145.00
IUUC-Pop-099312	Populus trichocarpa	48.68	6.00e-99	353.00
IUUC-Ppe-101406	Prunus persica	47.74	5.00e-104	371.00
IUUC-Pyt-104721	Pyrenophora triticirepentis	39.02	2.00e-10	61.60
IUUC-Sly-111602	Solanum lycopersicum	41.28	6.00e-89	320.00
IUUC-Stu-112797	Solanum tuberosum	43.77	5.00e-90	324.00
IUUC-Tca-120967	Theobroma cacao	47.07	2.00e-85	308.00
IUUC-Tae-124576	Triticum aestivum	38.81	1.00e-60	227.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence