iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043784

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000851

Gene Name

13-1-1; GLYMA_18G042100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA18G04770	GLYMA18G04770.1	GLYMA18G04770.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.70e-34	116.9	29	101

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p +f+Cp+slelM+dPv+l++Gitydr sIekw++ g++tcPvt+q lt  d++Pn+++rr+iq+wc enss
   Q: 29   IPNHFHCPVSLELMTDPVTLSTGITYDRVSIEKWIEGGNRTCPVTNQVLTTFDIIPNHAIRRMIQDWCVENSS 101
           799*******************************************************************986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MVLSWSRRNV FRRAKKEKSQ TQLEVEVVIP NHFHCPVSLE LMTDPVTLST GITYDRVSIE 60
KWIEGGNRTC PVTNQVLTTF DIIPNHAIRR MIQDWCVENS SYGIDRIPTP RIPISAYEVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACGCAACCT TCTGTTCCTC ATTCACCTCA CACCTTCATC ACAACAAAAA GAAAGAAAGA 60
AACAAAGATC GTTCATTGCT TTGTAGTAAG ATCAGATCAT CAAAAATGGT TTTGTCTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006171	Arabidopsis lyrata	46.31	5.00e-94	337.00
IUUC-Ath-007692	Arabidopsis thaliana	47.29	2.00e-91	329.00
IUUC-Bra-017285	Brassica rapa	45.39	1.00e-99	356.00
IUUC-Mtr-058119	Medicago truncatula	67.81	2.00e-159	555.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence