iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099312

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000353

Gene Name

POPTRDRAFT_851637; POPTR_0017s02470g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0017s02470	POPTR_0017s02470.1	POPTR_0017s02470.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.10e-33	114.8	30	101

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           p +f+CpIsl+lM+dPv+l++Gitydr+sIekw+++g+ tcPvt+q l++ d++Pn+++r++iq+wc en+s
   Q: 30   PRHFCCPISLDLMKDPVTLSTGITYDRESIEKWIEEGNLTCPVTNQVLASYDQIPNHSIRKMIQDWCVENRS 101
           899*****************************************************************9975 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MILSWRSRRN SKKNKIPSQE INSDMEISNP RHFCCPISLD LMKDPVTLST GITYDRESIE 60
KWIEEGNLTC PVTNQVLASY DQIPNHSIRK MIQDWCVENR SYGVERIPTP RVPVTPYDVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCGAATTCT CTAGCCCACA AGCAAAACCC AAAACATACC TTACAGACCT TGACATAACT 60
AGATAAATTC AAGCATATAC AATGATACTT TCCTGGAGAT CAAGAAGAAA TTCGAAGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0017s02470g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006171	Arabidopsis lyrata	50.48	3.00e-107	381.00
IUUC-Ath-007692	Arabidopsis thaliana	49.78	2.00e-106	379.00
IUUC-Bol-016269	Brassica oleracea	48.44	8.00e-103	367.00
IUUC-Bra-017285	Brassica rapa	48.23	4.00e-110	390.00
IUUC-Gma-043233	Glycine max	55.85	2.00e-126	445.00
IUUC-Mtr-058526	Medicago truncatula	52.74	2.00e-117	415.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence