iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__3217__AT5G42010.1	fgenesh2_kg.7__3217__AT5G42010.1	fgenesh2_kg.7__3217__AT5G42010.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-22	78.7	403	437

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           H++ vtc+af   +d++++sGs Dg +++WD++ +
   Q: 403  HKSFVTCVAFnpvDDNFFISGSIDGIVRIWDVSHF 437
           8999********766****************9765 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGTRGNEEEE DWFCDAREEV SSVSDCNSEV ADEFVQATGD IDLWTMNPES VTNRRQKFFQ 60
SMGFSFKKRD FDLDLDLLGD SSSDHIPVSK QLNSVSETDH EEEDKEEKLL RNESTSSGSS 120

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Nucleotide Sequence
(Fasta)

ATGGGTACTC GAGGGAACGA GGAAGAGGAA GATTGGTTTT GTGATGCTCG TGAAGAGGTT 60
TCATCTGTTT CTGATTGTAA CTCTGAAGTC GCCGATGAAT TTGTTCAAGC AACTGGTGAT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_493784

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006672	Arabidopsis thaliana	93.65	0.00e+00	1191.00
IUUC-Bol-016569	Brassica oleracea	75.14	0.00e+00	922.00
IUUC-Bra-017207	Brassica rapa	74.38	0.00e+00	811.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence