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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Ath-006672
UUCD1 version UUC-ArT-00823
Ensembl Protein ID AT5G42010.1
UniProt Accession Q9FHY2; Q9FHY2_ARATH
Genbank Protein ID AED94754.1; BAB08434.1
Protein Name Similarity to unknown protein; Transducin/WD40 repeat-like superfamily protein
Genbank Nucleotide ID CP002688; AB017067
Gene Name MJC20.11; MJC20_11; At5g42010
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT5G42010 AT5G42010.2 AT5G42010.2
AT5G42010 AT5G42010.1 AT5G42010.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.10e-23 81.8 403 439
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
    H++ vtc+af +d++++sGs Dg++++WD++++++
   Q: 403 HKSFVTCVAFnpvDDNYFISGSIDGKVRIWDVSQFRV 439
    8999********766*****************98876 PP
   

Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MGTRGNEEEE DWFSDAREEV SSVSDCNSEV ADDFVQATGD LDLWTMNPES VTNRRQKFFQ 60
SMGFSFKKRD FDLDLDLLGD SSSDHIPVSK QLTSVSETDH EEEEKEEKLL RNESTSSGSS 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-006672|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAGGATCTTT GTTCTGTTTT ATTTGTTTCT CTCTTCCTCT CTTCTTCTTC TTCTTCTTCG 60
TACAATCGAA GAAACAAAAC CTCTCAATTT CCGAATATCT CGCTCTTAAA CCCTCTCCAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-006672|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-006111 Arabidopsis lyrata 93.65 0.00e+00 1224.00
IUUC-Bol-016569 Brassica oleracea 75.14 0.00e+00 912.00
Created Date 25-Jun-2017

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