iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__3321__AT5G40880.1	fgenesh2_kg.7__3321__AT5G40880.1	fgenesh2_kg.7__3321__AT5G40880.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-23	81.1	305	339

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrtgvll 36
           H+++vtc+   +  ll sGs D+tikvWDl t  ++
   Q: 305  HSGDVTCFVV-GgQLLYSGSVDKTIKVWDLNTLQCV 339
           99*****654.448****************999887 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDEATVIDSV VQSSKVSIFS MFSMDYKAPR RYSHGRNFGV ARQQDFAADI VTRRPYVPYD 60
SGMKKGRNNL SRNLVWTSKE YKAPEGDRPR KIAANGSTKP PVLGTGNCVS NQPRKSAAYG 120

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Nucleotide Sequence
(Fasta)

TTTCCTCCGT CTCAAAATTT CCTTTTTGGC TCTCTACGAT CTTCGTTCGA AATCGTTCCC 60
TAATCGAAGA TCTAGATTCT ACATACGTTT GATCTCTCAG GTTTGCTTCT TCTTCGACTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40
PF00642--zf-CCCH

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

KEGG

aly:ARALYDRAFT_493888

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007068	Arabidopsis thaliana	87.07	0.00e+00	841.00
IUUC-Bol-015705	Brassica oleracea	75.72	0.00e+00	688.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence