iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111727

Ensembl Protein ID

Solyc01g111860.2.1

UniProt Accession

K4B448; K4B448_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g111860.2	Solyc01g111860.2.1	Solyc01g111860.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-19	68.6	52	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           H + v+ ++f +d ++++sGsdD  i +WD+ tg+ 
   Q: 52   HRGCVNTVSFnPDgDIVISGSDDRRIILWDWETGKI 87
           999********999*****************99985 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MRKTTRSSID CAVVDVWKRA VGELSTRNFA HRLGASEDLV LRLDVFRKLE KHRGCVNTVS 60
FNPDGDIVIS GSDDRRIILW DWETGKIALS FHSGHHNNVF QAKIMPYTDD RSIVTCAADG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAAGTAAA AGGGAGGTGC AGTGTGTTCG TTCCCCTTGT CGCAGTTGCA AAATACAATC 60
AGTAAGAACC AAAGCGTATG GTAGCGGCGA GATCTTACAA GTTAATCTCA ATCAATCCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000666	Aegilops tauschii	59.58	3.00e-131	461.00
IUUC-Atr-002714	Amborella trichopoda	60.48	2.00e-142	498.00
IUUC-Aly-005505	Arabidopsis lyrata	65.38	4.00e-155	540.00
IUUC-Ath-007629	Arabidopsis thaliana	64.37	2.00e-151	528.00
IUUC-Bdi-014538	Brachypodium distachyon	62.17	3.00e-139	487.00
IUUC-Bol-015797	Brassica oleracea	63.04	2.00e-155	541.00
IUUC-Bra-017142	Brassica rapa	61.84	7.00e-152	529.00
IUUC-Cho-024527	Choloepus hoffmanni	26.51	6.00e-24	105.00
IUUC-Gma-044062	Glycine max	72.99	3.00e-180	624.00
IUUC-Hvu-047075	Hordeum vulgare	61.13	1.00e-133	468.00
IUUC-Itr-048849	Ictidomys tridecemlineatus	40.28	2.00e-73	269.00
IUUC-Lpe-051327	Leersia perrieri	60.80	4.00e-136	477.00
IUUC-Mtr-058683	Medicago truncatula	71.86	0.00e+00	642.00
IUUC-Mac-065466	Musa acuminata	65.27	9.00e-161	559.00
IUUC-Oba-075028	Oryza barthii	60.40	2.00e-138	484.00
IUUC-Obr-076114	Oryza brachyantha	62.17	7.00e-139	486.00
IUUC-Ogl-077918	Oryza glaberrima	60.40	3.00e-138	484.00
IUUC-Ogu-078824	Oryza glumaepatula	60.40	3.00e-138	484.00
IUUC-Oin-080061	Oryza indica	60.79	6.00e-138	483.00
IUUC-Olo-081064	Oryza longistaminata	61.48	4.00e-137	480.00
IUUC-Ome-081405	Oryza meridionalis	60.40	5.00e-138	483.00
IUUC-Oni-082481	Oryza nivara	58.89	1.00e-135	475.00
IUUC-Opu-083681	Oryza punctata	61.10	2.00e-139	488.00
IUUC-Oru-084398	Oryza rufipogon	60.79	5.00e-138	483.00
IUUC-Osa-086227	Oryza sativa	60.40	1.00e-137	482.00
IUUC-Pop-099784	Populus trichocarpa	64.37	4.00e-171	593.00
IUUC-Ppe-101712	Prunus persica	70.65	0.00e+00	666.00
IUUC-Sit-110744	Setaria italica	60.35	3.00e-139	487.00
IUUC-Stu-112421	Solanum tuberosum	97.07	0.00e+00	902.00
IUUC-Sbi-114821	Sorghum bicolor	59.25	2.00e-138	484.00
IUUC-Tca-121555	Theobroma cacao	72.62	0.00e+00	654.00
IUUC-Tae-124601	Triticum aestivum	60.87	7.00e-135	473.00
IUUC-Tur-126617	Triticum urartu	61.13	3.00e-134	471.00
IUUC-Vvi-131540	Vitis vinifera	72.14	0.00e+00	634.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence