iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099504

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin family protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTR_0006s19520g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s19520	POPTR_0006s19520.1	POPTR_0006s19520.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/ECS/Elon-B_C	27.47	1.00e-03	38.90	IUUC-Hsa-046790
ULD/UDP/UBQ/UBQ_Other	27.47	1.00e-03	38.90	IUUC-Hsa-046790

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MYIRVKRNKT TYFIQCDPTE KTLEIKQKLN VLIDQPVNDQ RLILVGTGEV LEDSKSLAEQ 60
KVENDAVVAL TLRKDDNEFE DVSIVRPDDF YQSRDADGTN W 101

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Nucleotide Sequence
(Fasta)

GGCTATGTAC ATCCGGGTTA AGCGTAACAA GACAACTTAC TTTATCCAGT GTGATCCAAC 60
TGAGAAAACT CTGGAGATTA AGCAGAAATT AAATGTCCTT ATTGATCAAC CAGTTAATGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

KEGG

pop:POPTR_0006s19520g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000067	Aegilops tauschii	74.32	1.00e-26	114.00
IUUC-Aml-001280	Ailuropoda melanoleuca	26.37	2.00e-05	40.00
IUUC-Atr-002796	Amborella trichopoda	68.37	3.00e-36	142.00
IUUC-Aca-004530	Anolis carolinensis	24.18	5.00e-04	35.80
IUUC-Aly-005974	Arabidopsis lyrata	78.89	8.00e-38	147.00
IUUC-Ath-007691	Arabidopsis thaliana	77.42	4.00e-38	148.00
IUUC-Ame-010804	Astyanax mexicanus	28.57	5.00e-06	42.40
IUUC-Bta-013207	Bos taurus	28.89	2.00e-05	40.40
IUUC-Bdi-014917	Brachypodium distachyon	68.37	3.00e-34	135.00
IUUC-Bol-015302	Brassica oleracea	80.00	7.00e-38	147.00
IUUC-Bra-016620	Brassica rapa	76.67	3.00e-36	142.00
IUUC-Cja-018927	Callithrix jacchus	28.57	3.00e-05	40.00
IUUC-Cfa-020172	Canis familiaris	25.00	1.10e-02	31.20
IUUC-Cpo-022344	Cavia porcellus	27.47	7.00e-05	38.50
IUUC-Cre-022721	Chlamydomonas reinhardtii	49.41	6.00e-18	81.60
IUUC-Csa-024213	Chlorocebus sabaeus	27.47	6.00e-05	38.90
IUUC-Csv-026001	Ciona savignyi	27.47	4.00e-04	35.80
IUUC-Dre-027429	Danio rerio	28.57	2.00e-04	37.00
IUUC-Dno-029254	Dasypus novemcinctus	27.47	8.00e-05	38.10
IUUC-Fca-036342	Felis catus	27.47	9.00e-05	38.10
IUUC-Gmo-039651	Gadus morhua	26.37	2.00e-03	33.90
IUUC-Gac-041732	Gasterosteus aculeatus	26.37	1.00e-03	34.70
IUUC-Gma-043862	Glycine max	79.21	3.00e-44	169.00
IUUC-Ggo-044725	Gorilla gorilla	27.47	9.00e-05	39.30
IUUC-Hsa-046790	Homo sapiens	27.47	6.00e-05	38.90
IUUC-Hvu-047856	Hordeum vulgare	70.49	1.00e-21	93.20
IUUC-Lpe-051645	Leersia perrieri	76.60	1.00e-37	146.00
IUUC-Laf-054303	Loxodonta africana	28.57	2.00e-05	40.40
IUUC-Mcc-055397	Macaca mulatta	29.67	1.00e-05	41.20
IUUC-Mtr-058736	Medicago truncatula	70.30	3.00e-40	155.00
IUUC-Mmr-061528	Microcebus murinus	27.47	9.00e-05	38.10
IUUC-Mdo-062545	Monodelphis domestica	28.57	5.00e-05	38.90
IUUC-Mmu-064363	Mus musculus	27.47	9.00e-05	38.10
IUUC-Mpu-066915	Mustela putorius furo	26.37	3.00e-04	36.60
IUUC-Nle-069826	Nomascus leucogenys	28.09	4.00e-04	37.40
IUUC-Ont-071245	Oreochromis niloticus	29.67	4.00e-06	42.40
IUUC-Oan-073548	Ornithorhynchus anatinus	23.91	1.60e-02	30.80
IUUC-Ocu-074024	Oryctolagus cuniculus	28.74	4.00e-04	36.20
IUUC-Obr-076724	Oryza brachyantha	76.60	5.00e-37	144.00
IUUC-Oin-080167	Oryza indica	76.60	4.00e-37	145.00
IUUC-Opu-084014	Oryza punctata	78.72	3.00e-38	148.00
IUUC-Osa-085650	Oryza sativa	76.60	4.00e-37	145.00
IUUC-Ola-086438	Oryzias latipes	27.47	9.00e-05	38.90
IUUC-Oar-090425	Ovis aries	26.37	3.00e-04	36.60
IUUC-Ptr-090487	Pan troglodytes	27.47	8.00e-05	39.30
IUUC-Pan-092779	Papio anubis	27.47	8.00e-05	39.30
IUUC-Ppa-095566	Physcomitrella patens	55.10	3.00e-25	105.00
IUUC-Pfo-097197	Poecilia formosa	29.67	1.00e-05	40.80
IUUC-Pab-098035	Pongo abelii	27.47	9.00e-05	38.90
IUUC-Ppe-101148	Prunus persica	85.15	5.00e-47	177.00
IUUC-Rno-105121	Rattus norvegicus	27.47	9.00e-05	38.10
IUUC-Sha-107566	Sarcophilus harrisii	27.71	5.00e-05	38.90
IUUC-Smo-108726	Selaginella moellendorffii	65.75	2.00e-24	102.00
IUUC-Sit-110780	Setaria italica	73.24	5.00e-26	107.00
IUUC-Sly-111382	Solanum lycopersicum	76.92	6.00e-38	147.00
IUUC-Stu-112245	Solanum tuberosum	76.62	1.00e-30	123.00
IUUC-Sar-113663	Sorex araneus	25.88	3.00e-04	35.80
IUUC-Sbi-114447	Sorghum bicolor	69.89	2.00e-34	135.00
IUUC-Ssc-115270	Sus scrofa	26.37	2.00e-04	36.60
IUUC-Tru-117747	Takifugu rubripes	28.57	9.00e-05	38.10
IUUC-Tni-120611	Tetraodon nigroviridis	29.89	4.00e-04	36.20
IUUC-Tca-121839	Theobroma cacao	85.15	7.00e-48	181.00
IUUC-Tae-125514	Triticum aestivum	72.04	3.00e-34	135.00
IUUC-Tur-126569	Triticum urartu	74.32	1.00e-27	115.00
IUUC-Ttr-128410	Tursiops truncatus	26.37	3.00e-04	37.00
IUUC-Vvi-130839	Vitis vinifera	83.00	2.00e-45	173.00
IUUC-Xtr-132615	Xenopus tropicalis	23.08	1.00e-03	34.30
IUUC-Xma-133408	Xiphophorus maculatus	28.57	2.00e-04	37.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence